| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757253
Identifier: 170757253
GI number: 170757253
Start: 2751117
End: 2751593
Strand: Reverse
Name: 170757253
Synonym: CLD_1986
Alternate gene names: NA
Gene position: 2751593-2751117 (Counterclockwise)
Preceding gene: 170754599
Following gene: 170754441
Centisome position: 69.52
GC content: 24.74
Gene sequence:
>477_bases GTGAAAATATTTTTATACACCTTTATGAGTTTATTATTTTTTAGTTCATTTGCCTTTCTTTTAACTGCAGGAAAGTTCAT ATATCATCATAAATATGGAAAAGCAGTTTTTAAAATCAACAGGAATAAATACAAGAAAAGTAAGATTGCTAAAAAAGAAT TCTTAATGACTGTAAGTCCTTTTAAGGACGAAAACAATAATGTATATTTGCCTTTAAAATATGTGGCAGATTCTTTAGGA ATAAAGCTATATAATGATGAGGAATATAGTGTAATTATAAAGGTAATGGATAAGAACGTTAAGGCTAATAAAAAAGGAAT CTTTATAGAGAATAGTTCAACAAATCTAAATACAAAAATAGATAAGAATATAAAAATTAGAAACAATGAATTAATGTTAC CACAGAGCTACATTAAAGATATCTTTGAAGTAAATATAGAGATAGATAATAAAACGGGAGAAGTAATTCTTAAATGA
Upstream 100 bases:
>100_bases ACTAACCAGGATATTATAATTAAATCAGATAAAAGTTGAATTTAATACTATATAATGTGTAGTTTAAATTTATTTTTTAT AATAATAAAGAGGTGATAGA
Downstream 100 bases:
>100_bases ATATATTAATAAAAAATTATGTGAAATTTAAAGAGAAGTTTTTTATAAATTAAAAACCCTATTTAGTTAAAGAGAGATTA TAACTAAATAGGGTGTTTTT
Product: copper amine oxidase domain-containing protein
Products: NA
Alternate protein names: Copper Amine Oxidase Domain-Containing Protein
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKIFLYTFMSLLFFSSFAFLLTAGKFIYHHKYGKAVFKINRNKYKKSKIAKKEFLMTVSPFKDENNNVYLPLKYVADSLG IKLYNDEEYSVIIKVMDKNVKANKKGIFIENSSTNLNTKIDKNIKIRNNELMLPQSYIKDIFEVNIEIDNKTGEVILK
Sequences:
>Translated_158_residues MKIFLYTFMSLLFFSSFAFLLTAGKFIYHHKYGKAVFKINRNKYKKSKIAKKEFLMTVSPFKDENNNVYLPLKYVADSLG IKLYNDEEYSVIIKVMDKNVKANKKGIFIENSSTNLNTKIDKNIKIRNNELMLPQSYIKDIFEVNIEIDNKTGEVILK >Mature_158_residues MKIFLYTFMSLLFFSSFAFLLTAGKFIYHHKYGKAVFKINRNKYKKSKIAKKEFLMTVSPFKDENNNVYLPLKYVADSLG IKLYNDEEYSVIIKVMDKNVKANKKGIFIENSSTNLNTKIDKNIKIRNNELMLPQSYIKDIFEVNIEIDNKTGEVILK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18502; Mature: 18502
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFLYTFMSLLFFSSFAFLLTAGKFIYHHKYGKAVFKINRNKYKKSKIAKKEFLMTVSP CEEHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCEEEEEECCHHHHHHHHHHHHEEEECC FKDENNNVYLPLKYVADSLGIKLYNDEEYSVIIKVMDKNVKANKKGIFIENSSTNLNTKI CCCCCCCEEEEHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCEEE DKNIKIRNNELMLPQSYIKDIFEVNIEIDNKTGEVILK CCCEEEECCEEECCHHHHHHHHEEEEEEECCCCCEEEC >Mature Secondary Structure MKIFLYTFMSLLFFSSFAFLLTAGKFIYHHKYGKAVFKINRNKYKKSKIAKKEFLMTVSP CEEHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCEEEEEECCHHHHHHHHHHHHEEEECC FKDENNNVYLPLKYVADSLGIKLYNDEEYSVIIKVMDKNVKANKKGIFIENSSTNLNTKI CCCCCCCEEEEHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCEEE DKNIKIRNNELMLPQSYIKDIFEVNIEIDNKTGEVILK CCCEEEECCEEECCHHHHHHHHEEEEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA