| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757249
Identifier: 170757249
GI number: 170757249
Start: 1195693
End: 1196061
Strand: Direct
Name: 170757249
Synonym: CLD_3489
Alternate gene names: NA
Gene position: 1195693-1196061 (Clockwise)
Preceding gene: 170756190
Following gene: 170754619
Centisome position: 30.21
GC content: 30.08
Gene sequence:
>369_bases ATGGCTGTAAGAGAATTAATATGTATAGGATGTCCATTGGGATGTAATCTAGAAGTAGAAATTGAAGATAAAGAAGTAAA GTCAGTTAAGGGAAATACTTGCCCTAGAGGAAAAATATATGCAGAGAAAGAATGTACAAATCCTACAAGGATCTTAACCA TATCTGTTAATGTAGAAAATGGAGAAGAAGATGTGGTTTGTGTTAAAACAGAAAAAGATATTCCAAAGGAAAAACTAATG GAATGTGTAAAAATATTAAAGGATACAACTGTACAAGCACCTATAAAAATAGGTGATGTAATAGTAGAAAATATAGCAGA TACAGGAGTAAATGTTATAGCTACAAAATGTCTAGGTTGTAAAAATTAA
Upstream 100 bases:
>100_bases TAGCTCCAGGTGAGATGGAAACAGTAAAATTAACTAAAGATATGTTTGAAAAACATTTAGATTGCAAAAAAATTACTGTT AAAGTGGAAGGTGAATAATT
Downstream 100 bases:
>100_bases ATATCAATAAGGATAGCTAATATAATATTAGCTATCCTTATTGACGGTTAATAAATATTGACAATAAAAGGAAAGAGGGA ATGACATAATGTTAAAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAVRELICIGCPLGCNLEVEIEDKEVKSVKGNTCPRGKIYAEKECTNPTRILTISVNVENGEEDVVCVKTEKDIPKEKLM ECVKILKDTTVQAPIKIGDVIVENIADTGVNVIATKCLGCKN
Sequences:
>Translated_122_residues MAVRELICIGCPLGCNLEVEIEDKEVKSVKGNTCPRGKIYAEKECTNPTRILTISVNVENGEEDVVCVKTEKDIPKEKLM ECVKILKDTTVQAPIKIGDVIVENIADTGVNVIATKCLGCKN >Mature_121_residues AVRELICIGCPLGCNLEVEIEDKEVKSVKGNTCPRGKIYAEKECTNPTRILTISVNVENGEEDVVCVKTEKDIPKEKLME CVKILKDTTVQAPIKIGDVIVENIADTGVNVIATKCLGCKN
Specific function: Unknown
COG id: COG3862
COG function: function code S; Uncharacterized protein with conserved CXXC pairs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13306; Mature: 13175
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRELICIGCPLGCNLEVEIEDKEVKSVKGNTCPRGKIYAEKECTNPTRILTISVNVEN CCCHHEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEEEECC GEEDVVCVKTEKDIPKEKLMECVKILKDTTVQAPIKIGDVIVENIADTGVNVIATKCLGC CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC KN CC >Mature Secondary Structure AVRELICIGCPLGCNLEVEIEDKEVKSVKGNTCPRGKIYAEKECTNPTRILTISVNVEN CCHHEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEEEECC GEEDVVCVKTEKDIPKEKLMECVKILKDTTVQAPIKIGDVIVENIADTGVNVIATKCLGC CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC KN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA