| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757245
Identifier: 170757245
GI number: 170757245
Start: 227954
End: 228478
Strand: Reverse
Name: 170757245
Synonym: CLD_0591
Alternate gene names: NA
Gene position: 228478-227954 (Counterclockwise)
Preceding gene: 170757516
Following gene: 170756429
Centisome position: 5.77
GC content: 19.43
Gene sequence:
>525_bases ATGAAAACTACCCATTTAAAATCTTCAAATATAGCTAAAGGTGGAATATTTACAGCTATAAGTTTTTTACTTATTTATTT AAGCACTATATTACCAGTAAATAAACTATCCTTATTGGCTACTGCTTCTGCTATTATTCCTATAGCTATAATAAGTACAA ATGCAAAGAATGGTTTTTTAGTATATTTATCCACATCAATTTTATGTTCCATAGTAGTTGGCATAAGTAGGATTTCTGTA ATTTTTTATATAGTATTTTTTGGGTTATATGGAATAATTAAATATTATATAGAAAGATTAAATAAACTTTATATAGAAAT AATATTAAAATTTGCATTTTTTAATATATGTTTAATCGTTTTATTATATATATATAAATTATTTTTCCAAGGTATTACTA TAATTAATAAATACATATATATATATTTTATTGTAGCTCAAATAGCCTTTATTGTATTTGATTATGTTTTAACTCTATTC ATATTTTATATTAATAAACATTTTATTAAAAATATAAAACCTTAA
Upstream 100 bases:
>100_bases TAAAATCTGTGGTACTCTTTATTGTATAGATTGTTGTTGTGAATGTTGTGGAGGAGATTTTATTAGTTGCTGCTAAAATA ATTTGGGGAGATGATGGTCT
Downstream 100 bases:
>100_bases TGTATTGACAAAATTATTCAATTTGTTATAATAAATTTTGTTAATATAATTATTGCCCATTCGCCAAATGGTAAGGCACC TGCCTCTGGAGCAGGCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKTTHLKSSNIAKGGIFTAISFLLIYLSTILPVNKLSLLATASAIIPIAIISTNAKNGFLVYLSTSILCSIVVGISRISV IFYIVFFGLYGIIKYYIERLNKLYIEIILKFAFFNICLIVLLYIYKLFFQGITIINKYIYIYFIVAQIAFIVFDYVLTLF IFYINKHFIKNIKP
Sequences:
>Translated_174_residues MKTTHLKSSNIAKGGIFTAISFLLIYLSTILPVNKLSLLATASAIIPIAIISTNAKNGFLVYLSTSILCSIVVGISRISV IFYIVFFGLYGIIKYYIERLNKLYIEIILKFAFFNICLIVLLYIYKLFFQGITIINKYIYIYFIVAQIAFIVFDYVLTLF IFYINKHFIKNIKP >Mature_174_residues MKTTHLKSSNIAKGGIFTAISFLLIYLSTILPVNKLSLLATASAIIPIAIISTNAKNGFLVYLSTSILCSIVVGISRISV IFYIVFFGLYGIIKYYIERLNKLYIEIILKFAFFNICLIVLLYIYKLFFQGITIINKYIYIYFIVAQIAFIVFDYVLTLF IFYINKHFIKNIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19963; Mature: 19963
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTHLKSSNIAKGGIFTAISFLLIYLSTILPVNKLSLLATASAIIPIAIISTNAKNGFL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCEE VYLSTSILCSIVVGISRISVIFYIVFFGLYGIIKYYIERLNKLYIEIILKFAFFNICLIV EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYIYKLFFQGITIINKYIYIYFIVAQIAFIVFDYVLTLFIFYINKHFIKNIKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTTHLKSSNIAKGGIFTAISFLLIYLSTILPVNKLSLLATASAIIPIAIISTNAKNGFL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCEE VYLSTSILCSIVVGISRISVIFYIVFFGLYGIIKYYIERLNKLYIEIILKFAFFNICLIV EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYIYKLFFQGITIINKYIYIYFIVAQIAFIVFDYVLTLFIFYINKHFIKNIKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA