Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is cotI [H]

Identifier: 170757228

GI number: 170757228

Start: 1925221

End: 1926279

Strand: Reverse

Name: cotI [H]

Synonym: CLD_2834

Alternate gene names: 170757228

Gene position: 1926279-1925221 (Counterclockwise)

Preceding gene: 170754879

Following gene: 170755909

Centisome position: 48.67

GC content: 23.61

Gene sequence:

>1059_bases
ATGGGGAATAGAAGAGTTATTAATTATGATGAAAGTGAAATCACCAAAAAAGAAAGACAAATGATTAATAAAGTACTAAG
TAAATATAATTTTAATGTTATAGATTTTTCTAAAGTAAGAAGTATGTATAAAGTTGAAACCACAACAGGAAATAAATGTT
TAAAGAGAACTAGACATGGAAAATACAAAATAAGGAATGGATTTATATTTGCAGAAGAATTAAAAAATGTAGGATTTAAC
AATATAGCCTCCTATTATAAAACTAAAGATGATAGAAATTATATAAAGTATAAAAAATGGGCATTTTATGCTACAGAATG
GATAGATGGTGATGAGTGTGATTTAAACGATATAGTAGAAGCAGAAAATTGTGCTAAAACCTTAGCTCACTTTCATAAAG
CTACCCAAAAAATTGATATAAACAGAGTAAAAGTTAAAAGTCATCTAAAAAAATGGCCTAAAAGATTTAATAAAAGAATA
TCTGATATGGATAGATTTAAAAACAATATAGAAAATAAAAAGATTAAAAATGAATTTGATATTATTTATAAGGAATATAT
AGATAGTTTTTATGAAAGGGCTATGGTAGCACTTTCCTTTTTAAATAAATCAGACTATTATAAATTATCTAAAGAAGCTC
AAGCAAATAAAACTCTATGCCATCATAGTTTTTATTATCAAAATATAATTAAAAAAGGCAGAGAATACTATATAATAGAT
TTAGACAACATAATAATAGATTTACAAGTAAATGATTTAGGAAAGTATATACGAAGACTTATGACTAAAAAAAGCTATCA
ATGGGATTTTGAAAAAACAAAAAGAATAATAGAAGCTTATAACTCTGAAAATAAGCTTACTAAAGAAGATTTAGAAGTTA
TGTTATCTTTGATTATATTCCCTCATAAGTTTTGGAAATTAGGTAAAAAACGATATATAAAGCACAAACATTGGCCAGAA
ACTAAATATATGAAAAAGCTAAATAAAATTATAAAATATGATGATATGCAAAGAGAATTTCTAGAAAATTATATAAAATA
TCTAGAACAATATGAATAG

Upstream 100 bases:

>100_bases
ATTATTATAAAACATGGTCTATTATTTTTTATATATTTTTTAGTAATATTCCCCGTATCTATTAATATAATTTAATAGAT
ATACTAAGGGAGGAATCCAG

Downstream 100 bases:

>100_bases
TATAGTATAAATTGACTTAAATTTCATTAAGATTTATACTATATGAGTAACTATAATAATTAATTAATAAAGAGGCTAGC
TATGTTCAAATGTATTAATT

Product: putative spore coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MGNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHGKYKIRNGFIFAEELKNVGFN
NIASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVEAENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRI
SDMDRFKNNIENKKIKNEFDIIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIID
LDNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIFPHKFWKLGKKRYIKHKHWPE
TKYMKKLNKIIKYDDMQREFLENYIKYLEQYE

Sequences:

>Translated_352_residues
MGNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHGKYKIRNGFIFAEELKNVGFN
NIASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVEAENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRI
SDMDRFKNNIENKKIKNEFDIIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIID
LDNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIFPHKFWKLGKKRYIKHKHWPE
TKYMKKLNKIIKYDDMQREFLENYIKYLEQYE
>Mature_351_residues
GNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHGKYKIRNGFIFAEELKNVGFNN
IASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVEAENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRIS
DMDRFKNNIENKKIKNEFDIIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIIDL
DNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIFPHKFWKLGKKRYIKHKHWPET
KYMKKLNKIIKYDDMQREFLENYIKYLEQYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009
- InterPro:   IPR014255 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 42974; Mature: 42843

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHG
CCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCHHHHHHHCCC
KYKIRNGFIFAEELKNVGFNNIASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVE
CEEECCCCEEHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHEEEHHCCCCCCCCHHHHHH
AENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRISDMDRFKNNIENKKIKNEFD
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIID
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LDNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIF
ECCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
PHKFWKLGKKRYIKHKHWPETKYMKKLNKIIKYDDMQREFLENYIKYLEQYE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHG
CCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCHHHHHHHCCC
KYKIRNGFIFAEELKNVGFNNIASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVE
CEEECCCCEEHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHEEEHHCCCCCCCCHHHHHH
AENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRISDMDRFKNNIENKKIKNEFD
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIID
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LDNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIF
ECCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
PHKFWKLGKKRYIKHKHWPETKYMKKLNKIIKYDDMQREFLENYIKYLEQYE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377 [H]