| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is cotI [H]
Identifier: 170757228
GI number: 170757228
Start: 1925221
End: 1926279
Strand: Reverse
Name: cotI [H]
Synonym: CLD_2834
Alternate gene names: 170757228
Gene position: 1926279-1925221 (Counterclockwise)
Preceding gene: 170754879
Following gene: 170755909
Centisome position: 48.67
GC content: 23.61
Gene sequence:
>1059_bases ATGGGGAATAGAAGAGTTATTAATTATGATGAAAGTGAAATCACCAAAAAAGAAAGACAAATGATTAATAAAGTACTAAG TAAATATAATTTTAATGTTATAGATTTTTCTAAAGTAAGAAGTATGTATAAAGTTGAAACCACAACAGGAAATAAATGTT TAAAGAGAACTAGACATGGAAAATACAAAATAAGGAATGGATTTATATTTGCAGAAGAATTAAAAAATGTAGGATTTAAC AATATAGCCTCCTATTATAAAACTAAAGATGATAGAAATTATATAAAGTATAAAAAATGGGCATTTTATGCTACAGAATG GATAGATGGTGATGAGTGTGATTTAAACGATATAGTAGAAGCAGAAAATTGTGCTAAAACCTTAGCTCACTTTCATAAAG CTACCCAAAAAATTGATATAAACAGAGTAAAAGTTAAAAGTCATCTAAAAAAATGGCCTAAAAGATTTAATAAAAGAATA TCTGATATGGATAGATTTAAAAACAATATAGAAAATAAAAAGATTAAAAATGAATTTGATATTATTTATAAGGAATATAT AGATAGTTTTTATGAAAGGGCTATGGTAGCACTTTCCTTTTTAAATAAATCAGACTATTATAAATTATCTAAAGAAGCTC AAGCAAATAAAACTCTATGCCATCATAGTTTTTATTATCAAAATATAATTAAAAAAGGCAGAGAATACTATATAATAGAT TTAGACAACATAATAATAGATTTACAAGTAAATGATTTAGGAAAGTATATACGAAGACTTATGACTAAAAAAAGCTATCA ATGGGATTTTGAAAAAACAAAAAGAATAATAGAAGCTTATAACTCTGAAAATAAGCTTACTAAAGAAGATTTAGAAGTTA TGTTATCTTTGATTATATTCCCTCATAAGTTTTGGAAATTAGGTAAAAAACGATATATAAAGCACAAACATTGGCCAGAA ACTAAATATATGAAAAAGCTAAATAAAATTATAAAATATGATGATATGCAAAGAGAATTTCTAGAAAATTATATAAAATA TCTAGAACAATATGAATAG
Upstream 100 bases:
>100_bases ATTATTATAAAACATGGTCTATTATTTTTTATATATTTTTTAGTAATATTCCCCGTATCTATTAATATAATTTAATAGAT ATACTAAGGGAGGAATCCAG
Downstream 100 bases:
>100_bases TATAGTATAAATTGACTTAAATTTCATTAAGATTTATACTATATGAGTAACTATAATAATTAATTAATAAAGAGGCTAGC TATGTTCAAATGTATTAATT
Product: putative spore coat protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MGNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHGKYKIRNGFIFAEELKNVGFN NIASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVEAENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRI SDMDRFKNNIENKKIKNEFDIIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIID LDNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIFPHKFWKLGKKRYIKHKHWPE TKYMKKLNKIIKYDDMQREFLENYIKYLEQYE
Sequences:
>Translated_352_residues MGNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHGKYKIRNGFIFAEELKNVGFN NIASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVEAENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRI SDMDRFKNNIENKKIKNEFDIIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIID LDNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIFPHKFWKLGKKRYIKHKHWPE TKYMKKLNKIIKYDDMQREFLENYIKYLEQYE >Mature_351_residues GNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHGKYKIRNGFIFAEELKNVGFNN IASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVEAENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRIS DMDRFKNNIENKKIKNEFDIIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIIDL DNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIFPHKFWKLGKKRYIKHKHWPET KYMKKLNKIIKYDDMQREFLENYIKYLEQYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 42974; Mature: 42843
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHG CCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCHHHHHHHCCC KYKIRNGFIFAEELKNVGFNNIASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVE CEEECCCCEEHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHEEEHHCCCCCCCCHHHHHH AENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRISDMDRFKNNIENKKIKNEFD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIID HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE LDNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIF ECCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH PHKFWKLGKKRYIKHKHWPETKYMKKLNKIIKYDDMQREFLENYIKYLEQYE HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNRRVINYDESEITKKERQMINKVLSKYNFNVIDFSKVRSMYKVETTTGNKCLKRTRHG CCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCHHHHHHHCCC KYKIRNGFIFAEELKNVGFNNIASYYKTKDDRNYIKYKKWAFYATEWIDGDECDLNDIVE CEEECCCCEEHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHEEEHHCCCCCCCCHHHHHH AENCAKTLAHFHKATQKIDINRVKVKSHLKKWPKRFNKRISDMDRFKNNIENKKIKNEFD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIYKEYIDSFYERAMVALSFLNKSDYYKLSKEAQANKTLCHHSFYYQNIIKKGREYYIID HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE LDNIIIDLQVNDLGKYIRRLMTKKSYQWDFEKTKRIIEAYNSENKLTKEDLEVMLSLIIF ECCEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH PHKFWKLGKKRYIKHKHWPETKYMKKLNKIIKYDDMQREFLENYIKYLEQYE HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]