| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757203
Identifier: 170757203
GI number: 170757203
Start: 1366144
End: 1367208
Strand: Direct
Name: 170757203
Synonym: CLD_3335
Alternate gene names: NA
Gene position: 1366144-1367208 (Clockwise)
Preceding gene: 170754912
Following gene: 170754332
Centisome position: 34.51
GC content: 25.82
Gene sequence:
>1065_bases ATGAAAAAAATTAAAATTATATTTGTATGGACACTAATTGCTATTGGTTTATCCTTTGCAGCTCTGCTTTTCGTGGATAA AGTTTATTTGTCTTCTGCTAAAACTTTTAAAATAAATAAAGTGGAAGAAGAGGATAAAAAAATAAAGAAAACTGTTTCTA TAGATGTGCCAGATTATGCAGAAAATATAAAAATATCTTACAATGGAGAATATATATCCTATCACACTGAAAATAAAATA GTTATAATAAATGTATCTAAAAAAGAGGAAAAATATGTAGAGTTTAAAAATGGAACAGTTAATTATACAGCCTGGCTTCC AGATAGGAATATATTATTTATAGGGGAAAAATCTGGAGGTAATAATGGTAGCTTTTTAGCTTTATTTTCTTATGATAGTG AAAAAAATGAAAAATTTCAGCTGGAAGATGAAAATGGGAAAAAAACTATAATAAATTTGCCAAATAACAATTATGATATA AAAAATATGACATTATCTACAGCTACTAATACTATATATTTAAAGGTGAAAAATGAACAAGGAAGAAGTAGAATCTATAG AATAAATACTATGGCCCAGCTTGAGAGAATAAGAAGTTTAGGAAATAACTTAGGAGAAATAGCTCTTATGAATAGCGAAG ATAGGGTAGTTTATGAAAATAAAAATGATGGCAATATTCATGTAGAAGGAAAAGACTATCCAATAACTATAAGAGATGGG GCTAATCATTGTCTTTTAGGTGTAGATGATAAGGATGTAATGTATATAGGTAAACTAAAAGGAAGTATGGAAGAAGAAAC TATAGAAAAAATTTATTACTGGAGCTTAGATGAGAAGACTATTAATAAAAAAGACATAGAATTGGAAAATCCAATTAACA AAAAAGATATAAAAATTCTTCCTAATGGTAAAATATTTTTTATTAATAATAATGAAAATAAAGTTAAAGAACTTATATCA AGAGAAGAAGTTAAATATAATGGAGTTTTTGAAGATATTTCAATGGATGCAATTGTATCTAAAGAAGGTAATAAGGTTAT TATAAAGCCTATTAGTTTAAAGTAG
Upstream 100 bases:
>100_bases TATTATAAAGGAAAAGTTATAAATAGACCTTGTAATTGGGATGGAGAAAGAACAGTAGCCACCTCCATATATGTAGAACC TTAAAGGAGAAGACTTACTT
Downstream 100 bases:
>100_bases TATTTATACAATTTTTATATTTAATTTTTGCTTTAAATGGTATAAACAGAGTTCTTGACTTTAGAGGGAGTGTTTACTCC CCCTGAAGCTTATTAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKKIKIIFVWTLIAIGLSFAALLFVDKVYLSSAKTFKINKVEEEDKKIKKTVSIDVPDYAENIKISYNGEYISYHTENKI VIINVSKKEEKYVEFKNGTVNYTAWLPDRNILFIGEKSGGNNGSFLALFSYDSEKNEKFQLEDENGKKTIINLPNNNYDI KNMTLSTATNTIYLKVKNEQGRSRIYRINTMAQLERIRSLGNNLGEIALMNSEDRVVYENKNDGNIHVEGKDYPITIRDG ANHCLLGVDDKDVMYIGKLKGSMEEETIEKIYYWSLDEKTINKKDIELENPINKKDIKILPNGKIFFINNNENKVKELIS REEVKYNGVFEDISMDAIVSKEGNKVIIKPISLK
Sequences:
>Translated_354_residues MKKIKIIFVWTLIAIGLSFAALLFVDKVYLSSAKTFKINKVEEEDKKIKKTVSIDVPDYAENIKISYNGEYISYHTENKI VIINVSKKEEKYVEFKNGTVNYTAWLPDRNILFIGEKSGGNNGSFLALFSYDSEKNEKFQLEDENGKKTIINLPNNNYDI KNMTLSTATNTIYLKVKNEQGRSRIYRINTMAQLERIRSLGNNLGEIALMNSEDRVVYENKNDGNIHVEGKDYPITIRDG ANHCLLGVDDKDVMYIGKLKGSMEEETIEKIYYWSLDEKTINKKDIELENPINKKDIKILPNGKIFFINNNENKVKELIS REEVKYNGVFEDISMDAIVSKEGNKVIIKPISLK >Mature_354_residues MKKIKIIFVWTLIAIGLSFAALLFVDKVYLSSAKTFKINKVEEEDKKIKKTVSIDVPDYAENIKISYNGEYISYHTENKI VIINVSKKEEKYVEFKNGTVNYTAWLPDRNILFIGEKSGGNNGSFLALFSYDSEKNEKFQLEDENGKKTIINLPNNNYDI KNMTLSTATNTIYLKVKNEQGRSRIYRINTMAQLERIRSLGNNLGEIALMNSEDRVVYENKNDGNIHVEGKDYPITIRDG ANHCLLGVDDKDVMYIGKLKGSMEEETIEKIYYWSLDEKTINKKDIELENPINKKDIKILPNGKIFFINNNENKVKELIS REEVKYNGVFEDISMDAIVSKEGNKVIIKPISLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40688; Mature: 40688
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKIIFVWTLIAIGLSFAALLFVDKVYLSSAKTFKINKVEEEDKKIKKTVSIDVPDYA CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHEEEEEEEECCCCC ENIKISYNGEYISYHTENKIVIINVSKKEEKYVEFKNGTVNYTAWLPDRNILFIGEKSGG CCEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCC NNGSFLALFSYDSEKNEKFQLEDENGKKTIINLPNNNYDIKNMTLSTATNTIYLKVKNEQ CCCCEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEEEEECCEEEEEEEECCC GRSRIYRINTMAQLERIRSLGNNLGEIALMNSEDRVVYENKNDGNIHVEGKDYPITIRDG CCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEEEECCCCEEEEEECC ANHCLLGVDDKDVMYIGKLKGSMEEETIEKIYYWSLDEKTINKKDIELENPINKKDIKIL CCEEEEECCCCCEEEEEECCCCCCHHHEEEEEEEECCCCCCCCCCCEECCCCCCCCEEEE PNGKIFFINNNENKVKELISREEVKYNGVFEDISMDAIVSKEGNKVIIKPISLK CCCEEEEEECCCHHHHHHHHHCCEEECCEEECCCEEEEEECCCCEEEEEEECCC >Mature Secondary Structure MKKIKIIFVWTLIAIGLSFAALLFVDKVYLSSAKTFKINKVEEEDKKIKKTVSIDVPDYA CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHEEEEEEEECCCCC ENIKISYNGEYISYHTENKIVIINVSKKEEKYVEFKNGTVNYTAWLPDRNILFIGEKSGG CCEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCC NNGSFLALFSYDSEKNEKFQLEDENGKKTIINLPNNNYDIKNMTLSTATNTIYLKVKNEQ CCCCEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEEEEECCEEEEEEEECCC GRSRIYRINTMAQLERIRSLGNNLGEIALMNSEDRVVYENKNDGNIHVEGKDYPITIRDG CCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEEEECCCCEEEEEECC ANHCLLGVDDKDVMYIGKLKGSMEEETIEKIYYWSLDEKTINKKDIELENPINKKDIKIL CCEEEEECCCCCEEEEEECCCCCCHHHEEEEEEEECCCCCCCCCCCEECCCCCCCCEEEE PNGKIFFINNNENKVKELISREEVKYNGVFEDISMDAIVSKEGNKVIIKPISLK CCCEEEEEECCCHHHHHHHHHCCEEECCEEECCCEEEEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA