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The map label for this gene is 170757139

Identifier: 170757139

GI number: 170757139

Start: 1223723

End: 1224367

Strand: Direct

Name: 170757139

Synonym: CLD_3462

Alternate gene names: NA

Gene position: 1223723-1224367 (Clockwise)

Preceding gene: 170755881

Following gene: 170754219

Centisome position: 30.92

GC content: 28.06

Gene sequence:

>645_bases
ATGAATACTAGAGATGAAATTAATAAAGATATACAAAAAGTGTTTAAAGATATAGATGAGCATATTTTAAAGGATGAGAA
ACCTTCTAATTATATAAATAAATTATATGAAGAAGGAAAATTAGAGGAATATCCTTTTGATATGCTTACAATCTTAAGAA
AAATAGATCAGTCACCTAAATATCATCCAGAGGGAAGCGTTTGGAATCATATTATGATGGTTTTAGATAATGGAGCCAAG
GAAAGAGATAAAAGTGAAAATGAAAGAATATTTATGTGGGCATGTCTTTTGCATGATATAGGTAAAGGAACTACTACAAA
AATTAGAAAAGGGAGAATAACTTCCTATAATCATGATAAAGAAGGGGAGAAATTAAGCATAAAATTTTTGAAATGCTTTA
CAGAGGATGAGGAATTTATAAAGGAAGTTTCTAAATTAGTAAGATGGCATATGCAACCTCTTTTTGTTAATAAAAATTTG
CCTTTTAAAGATATAGAATCTATGGTGAAAGAAGTTTCTATTAAAGAAATAGCTCTAATTTCTTTATGTGATAGATTGGG
AAGGGGAGGCATGTCAGAAGGAAAAAAAGAAGAGGAAATTAAAGCAATAGATTTATTTATAGAGAAATGCTCCAATTATA
TGTAA

Upstream 100 bases:

>100_bases
TTAATGTAATTTAAAATAGAAGTTATAAATTAATTAATATGATATGAGATGAAATTTTAATGAAAAACTTAAAGAATAAG
TGTGAGTATAGGAGGACTTT

Downstream 100 bases:

>100_bases
TAATATTTTCATTTGCATTATAATAGTATATATGATGTAAAGAAGGGAAATAAATATGGAGAATATAAGAAATATATTGG
AAAAACAGAAGAGTTTTTTT

Product: HD domain-containing protein

Products: NA

Alternate protein names: Polynucleotide Adenylyltransferase Region; HD Superfamily Hydrolase; Poly A Polymerase; Metal Dependent Phophohydrolase; HD Domain-Containing Protein; PolyA Polymerase-Like Protein; HD Domain Protein; tRNA Nucleotidyltransferase/Poly(A) Polymerase; PolyA Polymerase Related Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNTRDEINKDIQKVFKDIDEHILKDEKPSNYINKLYEEGKLEEYPFDMLTILRKIDQSPKYHPEGSVWNHIMMVLDNGAK
ERDKSENERIFMWACLLHDIGKGTTTKIRKGRITSYNHDKEGEKLSIKFLKCFTEDEEFIKEVSKLVRWHMQPLFVNKNL
PFKDIESMVKEVSIKEIALISLCDRLGRGGMSEGKKEEEIKAIDLFIEKCSNYM

Sequences:

>Translated_214_residues
MNTRDEINKDIQKVFKDIDEHILKDEKPSNYINKLYEEGKLEEYPFDMLTILRKIDQSPKYHPEGSVWNHIMMVLDNGAK
ERDKSENERIFMWACLLHDIGKGTTTKIRKGRITSYNHDKEGEKLSIKFLKCFTEDEEFIKEVSKLVRWHMQPLFVNKNL
PFKDIESMVKEVSIKEIALISLCDRLGRGGMSEGKKEEEIKAIDLFIEKCSNYM
>Mature_214_residues
MNTRDEINKDIQKVFKDIDEHILKDEKPSNYINKLYEEGKLEEYPFDMLTILRKIDQSPKYHPEGSVWNHIMMVLDNGAK
ERDKSENERIFMWACLLHDIGKGTTTKIRKGRITSYNHDKEGEKLSIKFLKCFTEDEEFIKEVSKLVRWHMQPLFVNKNL
PFKDIESMVKEVSIKEIALISLCDRLGRGGMSEGKKEEEIKAIDLFIEKCSNYM

Specific function: Unknown

COG id: COG0617

COG function: function code J; tRNA nucleotidyltransferase/poly(A) polymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25225; Mature: 25225

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRDEINKDIQKVFKDIDEHILKDEKPSNYINKLYEEGKLEEYPFDMLTILRKIDQSPK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC
YHPEGSVWNHIMMVLDNGAKERDKSENERIFMWACLLHDIGKGTTTKIRKGRITSYNHDK
CCCCCHHHHHHHHHHHCCCHHCCCCCCCEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
EGEKLSIKFLKCFTEDEEFIKEVSKLVRWHMQPLFVNKNLPFKDIESMVKEVSIKEIALI
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHHH
SLCDRLGRGGMSEGKKEEEIKAIDLFIEKCSNYM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTRDEINKDIQKVFKDIDEHILKDEKPSNYINKLYEEGKLEEYPFDMLTILRKIDQSPK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC
YHPEGSVWNHIMMVLDNGAKERDKSENERIFMWACLLHDIGKGTTTKIRKGRITSYNHDK
CCCCCHHHHHHHHHHHCCCHHCCCCCCCEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
EGEKLSIKFLKCFTEDEEFIKEVSKLVRWHMQPLFVNKNLPFKDIESMVKEVSIKEIALI
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHHH
SLCDRLGRGGMSEGKKEEEIKAIDLFIEKCSNYM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA