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The map label for this gene is yaaJ [C]

Identifier: 170757072

GI number: 170757072

Start: 1424574

End: 1425926

Strand: Direct

Name: yaaJ [C]

Synonym: CLD_3273

Alternate gene names: 170757072

Gene position: 1424574-1425926 (Clockwise)

Preceding gene: 170756499

Following gene: 170754422

Centisome position: 35.99

GC content: 33.11

Gene sequence:

>1353_bases
ATGGATCTTCTAAATGCAGTTAAAGGAATAAACAATGTACTGTGGAATTATATACTGATTTTTTTATTGTGTGGAACAGG
TGTTGTATTTACTGTGTCTCTAAAATTTGTTCAAGTCTCTAAATTTAAGGAATCCTTTAAAAAAGCCTTTGGAGGTATAA
GTTTAAGAGGCAAAAAAGCAGGTAAAGATGGAATGAGTTCGTTTCAATCATTAGCAACAGCAGTAGCTGCTCAGGTGGGT
ACAGGAAATTTAGCAGGAGCAGCAACAGCTATAGTATCAGGGGGACCAGGAGCAATTTTTTGGATGTGGATTAGTGCATT
TTTAGGAATGGCAACTATTTTTGGAGAAGCGGTTTTAGCACAGATTTTTAAAGAAAAAGTTAATGGAGAAGTTACAGGGG
GGCCAGCTTATTATATAAGTAAGGGACTGAAAAGTAAATTTTTAGCTAGTTTTTTTTCTGTAACTATAATATTAGCCCTA
GGATTTATAGGTAATATGGTTCAGGCCAATTCTATAGGAGCAGCTTTTTCAAATATTTCTAATATACCATCTTGGATAAT
AGGAATAATGATTGCAATACTTGGGCTAGTTGTTTTTGCGGGAGGAATAGGAAGAATCGCCTCCGTAACGGAAAAAATGG
TTCCTATAATGGCGGCATTTTATATTATAGGAAGTATTATAATATTAGCTAAGAACTATACAAATATATTACCTGCTTTT
AAATTAATATTTGTCTCTGCTTTTAATCCTAAGGCCGCTGTAGGCGGAGTAGCAGGTGTTACTGTAAAACAGGCTATACG
ATATGGAGTAGCAAGAGGATTATTCTCCAATGAAGCTGGAATGGGATCAACACCACATGCCCATGCGGTAGCTAAGGTAA
AACATCCAGTAGAACAAGGATTAGTAGCTATAGTTGGAGTATTTATAGATACTTTTATAGTTCTTACATTTACAGCATTT
GTAATACTTACAACAGGAGTATTAGATGGAAAAACAACAGGCATAGAATTGACACAAAATGCATTTACTCAGGGATTAGG
TAATTTTGGTGCATATTTTATAGCCATCGCATTATTTTTCTTTGCTTTTTCAACAATAATTGGATGGTATTTCTTTGGAG
AAGCTAATGTAAAATATCTCTTTAAAGGCAAGGGATTAAATATATATAGATTGTTAGTGGCAGTTTTTATAGTTGTAGGA
ACAACTTTAAAAGTAGATTTAGTTTGGGAGCTTGCAGATACTTTTAATGGACTTATGGTAATTCCTAATGTAATAGCATT
GATAGCTTTATCTAAAATAGTAAAAGAGTCATTAAAGGATTATAATGAAAATTTTAAAGTTATAGATAAATAA

Upstream 100 bases:

>100_bases
TAAAAAAATATGTTAAAGATGTAACATATTGGCAGGAATTAATATGTTCATATGGAATATATATGTAATGTGTGTATTTA
ATTTACAAGGAGGAGTATAT

Downstream 100 bases:

>100_bases
ATACTAAGAAACTCTAACTATATTAATAAATTAAAGTATTAATATAAGGATATATTTAAAGAATACCAAATTTAAAAGAA
GGTTTTATATATAATAAGCA

Product: sodium:alanine symporter family protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MDLLNAVKGINNVLWNYILIFLLCGTGVVFTVSLKFVQVSKFKESFKKAFGGISLRGKKAGKDGMSSFQSLATAVAAQVG
TGNLAGAATAIVSGGPGAIFWMWISAFLGMATIFGEAVLAQIFKEKVNGEVTGGPAYYISKGLKSKFLASFFSVTIILAL
GFIGNMVQANSIGAAFSNISNIPSWIIGIMIAILGLVVFAGGIGRIASVTEKMVPIMAAFYIIGSIIILAKNYTNILPAF
KLIFVSAFNPKAAVGGVAGVTVKQAIRYGVARGLFSNEAGMGSTPHAHAVAKVKHPVEQGLVAIVGVFIDTFIVLTFTAF
VILTTGVLDGKTTGIELTQNAFTQGLGNFGAYFIAIALFFFAFSTIIGWYFFGEANVKYLFKGKGLNIYRLLVAVFIVVG
TTLKVDLVWELADTFNGLMVIPNVIALIALSKIVKESLKDYNENFKVIDK

Sequences:

>Translated_450_residues
MDLLNAVKGINNVLWNYILIFLLCGTGVVFTVSLKFVQVSKFKESFKKAFGGISLRGKKAGKDGMSSFQSLATAVAAQVG
TGNLAGAATAIVSGGPGAIFWMWISAFLGMATIFGEAVLAQIFKEKVNGEVTGGPAYYISKGLKSKFLASFFSVTIILAL
GFIGNMVQANSIGAAFSNISNIPSWIIGIMIAILGLVVFAGGIGRIASVTEKMVPIMAAFYIIGSIIILAKNYTNILPAF
KLIFVSAFNPKAAVGGVAGVTVKQAIRYGVARGLFSNEAGMGSTPHAHAVAKVKHPVEQGLVAIVGVFIDTFIVLTFTAF
VILTTGVLDGKTTGIELTQNAFTQGLGNFGAYFIAIALFFFAFSTIIGWYFFGEANVKYLFKGKGLNIYRLLVAVFIVVG
TTLKVDLVWELADTFNGLMVIPNVIALIALSKIVKESLKDYNENFKVIDK
>Mature_450_residues
MDLLNAVKGINNVLWNYILIFLLCGTGVVFTVSLKFVQVSKFKESFKKAFGGISLRGKKAGKDGMSSFQSLATAVAAQVG
TGNLAGAATAIVSGGPGAIFWMWISAFLGMATIFGEAVLAQIFKEKVNGEVTGGPAYYISKGLKSKFLASFFSVTIILAL
GFIGNMVQANSIGAAFSNISNIPSWIIGIMIAILGLVVFAGGIGRIASVTEKMVPIMAAFYIIGSIIILAKNYTNILPAF
KLIFVSAFNPKAAVGGVAGVTVKQAIRYGVARGLFSNEAGMGSTPHAHAVAKVKHPVEQGLVAIVGVFIDTFIVLTFTAF
VILTTGVLDGKTTGIELTQNAFTQGLGNFGAYFIAIALFFFAFSTIIGWYFFGEANVKYLFKGKGLNIYRLLVAVFIVVG
TTLKVDLVWELADTFNGLMVIPNVIALIALSKIVKESLKDYNENFKVIDK

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=450, Percent_Identity=39.7777777777778, Blast_Score=296, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47860; Mature: 47860

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLNAVKGINNVLWNYILIFLLCGTGVVFTVSLKFVQVSKFKESFKKAFGGISLRGKKA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEECCCCC
GKDGMSSFQSLATAVAAQVGTGNLAGAATAIVSGGPGAIFWMWISAFLGMATIFGEAVLA
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QIFKEKVNGEVTGGPAYYISKGLKSKFLASFFSVTIILALGFIGNMVQANSIGAAFSNIS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIPSWIIGIMIAILGLVVFAGGIGRIASVTEKMVPIMAAFYIIGSIIILAKNYTNILPAF
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KLIFVSAFNPKAAVGGVAGVTVKQAIRYGVARGLFSNEAGMGSTPHAHAVAKVKHPVEQG
HHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
LVAIVGVFIDTFIVLTFTAFVILTTGVLDGKTTGIELTQNAFTQGLGNFGAYFIAIALFF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
FAFSTIIGWYFFGEANVKYLFKGKGLNIYRLLVAVFIVVGTTLKVDLVWELADTFNGLMV
HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHH
IPNVIALIALSKIVKESLKDYNENFKVIDK
HHHHHHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MDLLNAVKGINNVLWNYILIFLLCGTGVVFTVSLKFVQVSKFKESFKKAFGGISLRGKKA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEECCCCC
GKDGMSSFQSLATAVAAQVGTGNLAGAATAIVSGGPGAIFWMWISAFLGMATIFGEAVLA
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QIFKEKVNGEVTGGPAYYISKGLKSKFLASFFSVTIILALGFIGNMVQANSIGAAFSNIS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIPSWIIGIMIAILGLVVFAGGIGRIASVTEKMVPIMAAFYIIGSIIILAKNYTNILPAF
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KLIFVSAFNPKAAVGGVAGVTVKQAIRYGVARGLFSNEAGMGSTPHAHAVAKVKHPVEQG
HHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
LVAIVGVFIDTFIVLTFTAFVILTTGVLDGKTTGIELTQNAFTQGLGNFGAYFIAIALFF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
FAFSTIIGWYFFGEANVKYLFKGKGLNIYRLLVAVFIVVGTTLKVDLVWELADTFNGLMV
HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHH
IPNVIALIALSKIVKESLKDYNENFKVIDK
HHHHHHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]