| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757024
Identifier: 170757024
GI number: 170757024
Start: 3283885
End: 3284772
Strand: Reverse
Name: 170757024
Synonym: CLD_1508
Alternate gene names: NA
Gene position: 3284772-3283885 (Counterclockwise)
Preceding gene: 170755110
Following gene: 170756248
Centisome position: 82.99
GC content: 27.03
Gene sequence:
>888_bases ATGACAAGTGGAAAAACTTTAGTTAATGTTGTGAAAGTTAATTTTATTGATGAGGTAACAAATACAAAACATACAATAGA AACAAGTAATGAAATAGATATAGAACCTATAAACAGTAAAGGTAAAAGAGATATATTAAGGATTAAAAATAAAATTTATG GAATAAATGAAACAGATGATATTGTTATAGGTTACAAGTTAAAAATGAAAGACAATCTATTTAATATAGAAACTATGGCT TTGATAGATGGAGGAACTATACAATATAATAAATATTGTGGAACAGAAGTAGGTATAGCAGTAGAAAGACATCCATTCAC TATGGAAATATTTACAGAGGAAAAAGATTATTCCAGAACTACAGGATATGTTAAGTTCGTGTATAAGCATTGTAAAGGTA AGCCAGCTAAATATAAAATTCAAGATGGAAAATTTTTAGTGTCTTCATATGAGGCTGAAAGTATACCATTTAGAAATGAA AAACCTGTAGAAATAGAATTTATAAATAAATTAGAAGAAAATGATAATGGAGAAAAGCCAGGAGAATCTACTCCAATTGA AGATATAGGAGTAGAAGGTGGAGAAGTAGAAAATAAAAATCCAGATGTAGGGGTAAGTATAACTAACAGGGTAGTGTGGA GTTTTTCTAATCAAATTAATCAAGATGATGTTAACTTAGAAAACTTTATTATAAAGAGAAAATCTGATGATTCTAGAGTA AATGGAAATGTAACTATAGATGATACTAAGAAAATAGTAACATTTGTACCTGATTCTTTATCAATAGATACAGTTTATAT TGCTGAAGCTAAAGAAATAAATAAATTAGATGGAAGTGGTAAAACTACAGCATTATCCACAGAATTTAAAACAATAAAAA TTAGATAG
Upstream 100 bases:
>100_bases CCTACAGGAAATGAAACACCAAGCATTATAGATTATGATGTACAAGCCTATACTACAAGCATAGAATATCAGCAATTTAA AAGTTTAAGGAGGTAATTTA
Downstream 100 bases:
>100_bases TGGGGGTATAACAAATGGATTTAAAAGTAACTAATATAGAAGATTTAAAAAAAGTAGCTCAAGGTGAAGTAATTCAGTTA CCACAATTTGGGCAAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTSGKTLVNVVKVNFIDEVTNTKHTIETSNEIDIEPINSKGKRDILRIKNKIYGINETDDIVIGYKLKMKDNLFNIETMA LIDGGTIQYNKYCGTEVGIAVERHPFTMEIFTEEKDYSRTTGYVKFVYKHCKGKPAKYKIQDGKFLVSSYEAESIPFRNE KPVEIEFINKLEENDNGEKPGESTPIEDIGVEGGEVENKNPDVGVSITNRVVWSFSNQINQDDVNLENFIIKRKSDDSRV NGNVTIDDTKKIVTFVPDSLSIDTVYIAEAKEINKLDGSGKTTALSTEFKTIKIR
Sequences:
>Translated_295_residues MTSGKTLVNVVKVNFIDEVTNTKHTIETSNEIDIEPINSKGKRDILRIKNKIYGINETDDIVIGYKLKMKDNLFNIETMA LIDGGTIQYNKYCGTEVGIAVERHPFTMEIFTEEKDYSRTTGYVKFVYKHCKGKPAKYKIQDGKFLVSSYEAESIPFRNE KPVEIEFINKLEENDNGEKPGESTPIEDIGVEGGEVENKNPDVGVSITNRVVWSFSNQINQDDVNLENFIIKRKSDDSRV NGNVTIDDTKKIVTFVPDSLSIDTVYIAEAKEINKLDGSGKTTALSTEFKTIKIR >Mature_294_residues TSGKTLVNVVKVNFIDEVTNTKHTIETSNEIDIEPINSKGKRDILRIKNKIYGINETDDIVIGYKLKMKDNLFNIETMAL IDGGTIQYNKYCGTEVGIAVERHPFTMEIFTEEKDYSRTTGYVKFVYKHCKGKPAKYKIQDGKFLVSSYEAESIPFRNEK PVEIEFINKLEENDNGEKPGESTPIEDIGVEGGEVENKNPDVGVSITNRVVWSFSNQINQDDVNLENFIIKRKSDDSRVN GNVTIDDTKKIVTFVPDSLSIDTVYIAEAKEINKLDGSGKTTALSTEFKTIKIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33313; Mature: 33182
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGKTLVNVVKVNFIDEVTNTKHTIETSNEIDIEPINSKGKRDILRIKNKIYGINETDD CCCCCEEEEEEEEEEHHHHCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCC IVIGYKLKMKDNLFNIETMALIDGGTIQYNKYCGTEVGIAVERHPFTMEIFTEEKDYSRT EEEEEEEEECCCEECEEEEEEEECCEEEECCCCCCEECEEEECCCEEEEEEECCCCCCCH TGYVKFVYKHCKGKPAKYKIQDGKFLVSSYEAESIPFRNEKPVEIEFINKLEENDNGEKP HHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEHHHHCCCCCCCC GESTPIEDIGVEGGEVENKNPDVGVSITNRVVWSFSNQINQDDVNLENFIIKRKSDDSRV CCCCCHHHHCCCCCCCCCCCCCEEEEEECEEEEEECCCCCCCCCCHHHEEEEECCCCCEE NGNVTIDDTKKIVTFVPDSLSIDTVYIAEAKEINKLDGSGKTTALSTEFKTIKIR CCCEEECCCCEEEEECCCCCCEEEEEEECCHHHHCCCCCCCEEEEEECEEEEEEC >Mature Secondary Structure TSGKTLVNVVKVNFIDEVTNTKHTIETSNEIDIEPINSKGKRDILRIKNKIYGINETDD CCCCEEEEEEEEEEHHHHCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCC IVIGYKLKMKDNLFNIETMALIDGGTIQYNKYCGTEVGIAVERHPFTMEIFTEEKDYSRT EEEEEEEEECCCEECEEEEEEEECCEEEECCCCCCEECEEEECCCEEEEEEECCCCCCCH TGYVKFVYKHCKGKPAKYKIQDGKFLVSSYEAESIPFRNEKPVEIEFINKLEENDNGEKP HHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEHHHHCCCCCCCC GESTPIEDIGVEGGEVENKNPDVGVSITNRVVWSFSNQINQDDVNLENFIIKRKSDDSRV CCCCCHHHHCCCCCCCCCCCCCEEEEEECEEEEEECCCCCCCCCCHHHEEEEECCCCCEE NGNVTIDDTKKIVTFVPDSLSIDTVYIAEAKEINKLDGSGKTTALSTEFKTIKIR CCCEEECCCCEEEEECCCCCCEEEEEEECCHHHHCCCCCCCEEEEEECEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA