| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757022
Identifier: 170757022
GI number: 170757022
Start: 741974
End: 743005
Strand: Direct
Name: 170757022
Synonym: CLD_0138
Alternate gene names: NA
Gene position: 741974-743005 (Clockwise)
Preceding gene: 170757381
Following gene: 170756197
Centisome position: 18.75
GC content: 22.67
Gene sequence:
>1032_bases ATGAAAATTGAAATACTTGATAAGTTAGATCCCATTTGTGAAATATTTGGATTGATTTATATGAGTCATGATTATGAAAA ATTTATTGATGCCTTAAAAAAAGAACTTAATAATAATGAAGTAAACGGAGAATTATTTCTAAAGAAAAATTTTAAGATAA TTGATAAATACATAAAAACTTTTGATAAATATAAGGTTATTAATGAAAATGAATTAATGTTCTTTGATGAGGATGATGAA TCTATTTTTATGCTAATTGCCTTTGTTCTTATTAATAATAAAGAGTTAATATATTCTTTAGATAATATAAAAGATGATCA GTTTAAATCTATAATTTTAGATGTTTATAATGAGATATCTGAGGAGGAAAGGACTATAGATTCTATTAGTACATTAAATA ATACAATAGAGTTTTTAAAAGAGCTAGATCTTAAAGAGAATACTAAATGGAAGTTAATGATAATTTTAAATGAGCCTAAG AAGTATTATAAATCTCTAATTAAGATAATAGAGGATAACAAAATTGCATATAATCAAGCTTGTAAAGCTATTGAGAAACC ATTATCTAAATTAATAAGTAATTATATTAAATATGTTAATTCCGATAAATGTGAAGTATTAAATAATATTATAAAAAATA ATGATAGTAATATTATTATAATTCCTACTCTAACATTTGGTACTTCATTATTTGAGTTTAAGAATACATACTTTATGGGT TTATTATATGAAATTATATGTAAAGAATATATTTATTCCATGGGAAATAAAGGAGAGCTTGTTTTAAAATTAAAGGCCTT AAGCGATAAAAGTAAATTAGAAATAATATCACTTTTGAAAGCTGGTCCTAAATATAGTTTAGAGATAGCGGAAGCTTTAA AGCTTACTCCAGCTACAGTTTCATATCATATGGGATCACTATTAGAATGTAGTATGGTTGTTGTAGAAAAGAAACAGGGT AAGGTATACTATCATTTAAATAAAATCGGATTAAAAAATTTTATAGATGAACTTAATAATACGTTATTATAA
Upstream 100 bases:
>100_bases AAGGATACTAATTATATAAGTAATATAGATAAATATATTAAATTTATTTTTATGATATAATGTGGATATTCTAGTAAATT AATTTATGGGAGTGAGTAAT
Downstream 100 bases:
>100_bases AAAATCTCTCAGTATAACTGGGAGATTTTTTTATTGAAATTAATTAGAAATATATCTAAAACATTTGACAAATATCTAAT TTAATAATATTATAAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKIEILDKLDPICEIFGLIYMSHDYEKFIDALKKELNNNEVNGELFLKKNFKIIDKYIKTFDKYKVINENELMFFDEDDE SIFMLIAFVLINNKELIYSLDNIKDDQFKSIILDVYNEISEEERTIDSISTLNNTIEFLKELDLKENTKWKLMIILNEPK KYYKSLIKIIEDNKIAYNQACKAIEKPLSKLISNYIKYVNSDKCEVLNNIIKNNDSNIIIIPTLTFGTSLFEFKNTYFMG LLYEIICKEYIYSMGNKGELVLKLKALSDKSKLEIISLLKAGPKYSLEIAEALKLTPATVSYHMGSLLECSMVVVEKKQG KVYYHLNKIGLKNFIDELNNTLL
Sequences:
>Translated_343_residues MKIEILDKLDPICEIFGLIYMSHDYEKFIDALKKELNNNEVNGELFLKKNFKIIDKYIKTFDKYKVINENELMFFDEDDE SIFMLIAFVLINNKELIYSLDNIKDDQFKSIILDVYNEISEEERTIDSISTLNNTIEFLKELDLKENTKWKLMIILNEPK KYYKSLIKIIEDNKIAYNQACKAIEKPLSKLISNYIKYVNSDKCEVLNNIIKNNDSNIIIIPTLTFGTSLFEFKNTYFMG LLYEIICKEYIYSMGNKGELVLKLKALSDKSKLEIISLLKAGPKYSLEIAEALKLTPATVSYHMGSLLECSMVVVEKKQG KVYYHLNKIGLKNFIDELNNTLL >Mature_343_residues MKIEILDKLDPICEIFGLIYMSHDYEKFIDALKKELNNNEVNGELFLKKNFKIIDKYIKTFDKYKVINENELMFFDEDDE SIFMLIAFVLINNKELIYSLDNIKDDQFKSIILDVYNEISEEERTIDSISTLNNTIEFLKELDLKENTKWKLMIILNEPK KYYKSLIKIIEDNKIAYNQACKAIEKPLSKLISNYIKYVNSDKCEVLNNIIKNNDSNIIIIPTLTFGTSLFEFKNTYFMG LLYEIICKEYIYSMGNKGELVLKLKALSDKSKLEIISLLKAGPKYSLEIAEALKLTPATVSYHMGSLLECSMVVVEKKQG KVYYHLNKIGLKNFIDELNNTLL
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39986; Mature: 39986
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEILDKLDPICEIFGLIYMSHDYEKFIDALKKELNNNEVNGELFLKKNFKIIDKYIKT CEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHH FDKYKVINENELMFFDEDDESIFMLIAFVLINNKELIYSLDNIKDDQFKSIILDVYNEIS HHHEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH EEERTIDSISTLNNTIEFLKELDLKENTKWKLMIILNEPKKYYKSLIKIIEDNKIAYNQA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHH CKAIEKPLSKLISNYIKYVNSDKCEVLNNIIKNNDSNIIIIPTLTFGTSLFEFKNTYFMG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHCHHHHHHHHHHHHH LLYEIICKEYIYSMGNKGELVLKLKALSDKSKLEIISLLKAGPKYSLEIAEALKLTPATV HHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH SYHMGSLLECSMVVVEKKQGKVYYHLNKIGLKNFIDELNNTLL HHHHCHHHHHHHHEEEECCCCEEEEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIEILDKLDPICEIFGLIYMSHDYEKFIDALKKELNNNEVNGELFLKKNFKIIDKYIKT CEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHH FDKYKVINENELMFFDEDDESIFMLIAFVLINNKELIYSLDNIKDDQFKSIILDVYNEIS HHHEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH EEERTIDSISTLNNTIEFLKELDLKENTKWKLMIILNEPKKYYKSLIKIIEDNKIAYNQA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHH CKAIEKPLSKLISNYIKYVNSDKCEVLNNIIKNNDSNIIIIPTLTFGTSLFEFKNTYFMG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHCHHHHHHHHHHHHH LLYEIICKEYIYSMGNKGELVLKLKALSDKSKLEIISLLKAGPKYSLEIAEALKLTPATV HHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH SYHMGSLLECSMVVVEKKQGKVYYHLNKIGLKNFIDELNNTLL HHHHCHHHHHHHHEEEECCCCEEEEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA