| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757015
Identifier: 170757015
GI number: 170757015
Start: 503809
End: 504864
Strand: Direct
Name: 170757015
Synonym: CLD_0348
Alternate gene names: NA
Gene position: 503809-504864 (Clockwise)
Preceding gene: 170756233
Following gene: 170757863
Centisome position: 12.73
GC content: 24.34
Gene sequence:
>1056_bases ATGAAGGTATCATCTGTAAAAGTTACTTTAACAGAAGTAGATATAATGACTTTAATAAAGGATTATTTAAAAGTTCCTGG ATTACATATTGAAAGTATTTACCTTGGGGATATTATAGAAGTAAAAGGTTCTTATACAAAGGGGATTTCTATACCTTTTT TTGCTAAATTAGCTTTGGGAAGTGTAAACAATAATACTATAAATATAAGAATATTTAAAATTAAGGTTATGAAATTGCAT ATAATTGATGCTATAAAGAAGTTGGCTTTAAAATTATCTTTAAGTAACTTTAAAGACTATGGTATATATGTTAAAAAGGA AAATATAAAAATAGATTTGGATATACTATCTAAAAAGATACCCTATACTTATTTTAAAATAGAAAAACTAAATTTATATA ATGGGTATGTGGACGTTTTTGTAGATAATATAGTTTACTCTAAAGAAAATGAAAAAGAAGAAAAAGAAGTTAAAGAAGAA AAATTTTCTTCAAATAAAAAGTATAAACCTATATATAAGAGAAAAGACAATTACTCTCTCACAAGAAAAAATTTAAAAAT TAAATTACCTAATAAGTATAATAAATTTTTTGAGTATTCTATGCTTATACCAGATATAACAGTACTTTTATATAGATTAC TTAAAGACAAAAGAGTAGATGTAAAAACTAAAACTCTTGTGGTTTCAGTATTAAGTTATATTGTTAGTCCAGTGGATATA ATTCCATCTTTTATACCTTTTATAGGACAAATAGATGATTTTGCTGTAGTATTTTTTGGATTAAATAAAATAATAGAGGA AGTTCCAGAAGAGATTATTCTAGAAAACTGGGAAGGACAGGGTAATATAATATTTTTGGTGAAGCAGGTAATAGGATATA TATCAAATATAATAGGAACAGAGAATGTAAAAACTCTTATGAAATTTGCTAATAATATTGTAGGGTTTATAAAAGAAAAA TATGATGGGAAAAGTAATTTAAAAGCACATAAGCAAGAAAATAAGGCTTATGAGGAGGTGGCATCTGTAGATGAAAAAAG TAATAATATACACTGA
Upstream 100 bases:
>100_bases GTACACTTAAAATTTATTAGTAATAATTATATTAGTTTTAGTATAATTGATTTTAGTGTATACTTATCTATAAGTGGAAG AGTAGAGGGGGAAGTAATGG
Downstream 100 bases:
>100_bases TGGAGCTTGCAGAGGAAATGGGCAAGAAAATACTATAGGGGCTTATGGAATAGTTTTAATGTATGGTGAACATAAAAAAG AAATAAAAAAAGCTTTTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKVSSVKVTLTEVDIMTLIKDYLKVPGLHIESIYLGDIIEVKGSYTKGISIPFFAKLALGSVNNNTINIRIFKIKVMKLH IIDAIKKLALKLSLSNFKDYGIYVKKENIKIDLDILSKKIPYTYFKIEKLNLYNGYVDVFVDNIVYSKENEKEEKEVKEE KFSSNKKYKPIYKRKDNYSLTRKNLKIKLPNKYNKFFEYSMLIPDITVLLYRLLKDKRVDVKTKTLVVSVLSYIVSPVDI IPSFIPFIGQIDDFAVVFFGLNKIIEEVPEEIILENWEGQGNIIFLVKQVIGYISNIIGTENVKTLMKFANNIVGFIKEK YDGKSNLKAHKQENKAYEEVASVDEKSNNIH
Sequences:
>Translated_351_residues MKVSSVKVTLTEVDIMTLIKDYLKVPGLHIESIYLGDIIEVKGSYTKGISIPFFAKLALGSVNNNTINIRIFKIKVMKLH IIDAIKKLALKLSLSNFKDYGIYVKKENIKIDLDILSKKIPYTYFKIEKLNLYNGYVDVFVDNIVYSKENEKEEKEVKEE KFSSNKKYKPIYKRKDNYSLTRKNLKIKLPNKYNKFFEYSMLIPDITVLLYRLLKDKRVDVKTKTLVVSVLSYIVSPVDI IPSFIPFIGQIDDFAVVFFGLNKIIEEVPEEIILENWEGQGNIIFLVKQVIGYISNIIGTENVKTLMKFANNIVGFIKEK YDGKSNLKAHKQENKAYEEVASVDEKSNNIH >Mature_351_residues MKVSSVKVTLTEVDIMTLIKDYLKVPGLHIESIYLGDIIEVKGSYTKGISIPFFAKLALGSVNNNTINIRIFKIKVMKLH IIDAIKKLALKLSLSNFKDYGIYVKKENIKIDLDILSKKIPYTYFKIEKLNLYNGYVDVFVDNIVYSKENEKEEKEVKEE KFSSNKKYKPIYKRKDNYSLTRKNLKIKLPNKYNKFFEYSMLIPDITVLLYRLLKDKRVDVKTKTLVVSVLSYIVSPVDI IPSFIPFIGQIDDFAVVFFGLNKIIEEVPEEIILENWEGQGNIIFLVKQVIGYISNIIGTENVKTLMKFANNIVGFIKEK YDGKSNLKAHKQENKAYEEVASVDEKSNNIH
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40540; Mature: 40540
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSSVKVTLTEVDIMTLIKDYLKVPGLHIESIYLGDIIEVKGSYTKGISIPFFAKLALG CCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCCCHHHHHHHHC SVNNNTINIRIFKIKVMKLHIIDAIKKLALKLSLSNFKDYGIYVKKENIKIDLDILSKKI CCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEHHHHHCCC PYTYFKIEKLNLYNGYVDVFVDNIVYSKENEKEEKEVKEEKFSSNKKYKPIYKRKDNYSL CEEEEEEEEEEEECCCHHHEEHHHEECCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEE TRKNLKIKLPNKYNKFFEYSMLIPDITVLLYRLLKDKRVDVKTKTLVVSVLSYIVSPVDI EECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHH IPSFIPFIGQIDDFAVVFFGLNKIIEEVPEEIILENWEGQGNIIFLVKQVIGYISNIIGT HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCC ENVKTLMKFANNIVGFIKEKYDGKSNLKAHKQENKAYEEVASVDEKSNNIH HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKVSSVKVTLTEVDIMTLIKDYLKVPGLHIESIYLGDIIEVKGSYTKGISIPFFAKLALG CCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCCCHHHHHHHHC SVNNNTINIRIFKIKVMKLHIIDAIKKLALKLSLSNFKDYGIYVKKENIKIDLDILSKKI CCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEHHHHHCCC PYTYFKIEKLNLYNGYVDVFVDNIVYSKENEKEEKEVKEEKFSSNKKYKPIYKRKDNYSL CEEEEEEEEEEEECCCHHHEEHHHEECCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEE TRKNLKIKLPNKYNKFFEYSMLIPDITVLLYRLLKDKRVDVKTKTLVVSVLSYIVSPVDI EECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHH IPSFIPFIGQIDDFAVVFFGLNKIIEEVPEEIILENWEGQGNIIFLVKQVIGYISNIIGT HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCC ENVKTLMKFANNIVGFIKEKYDGKSNLKAHKQENKAYEEVASVDEKSNNIH HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA