Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756987

Identifier: 170756987

GI number: 170756987

Start: 2813740

End: 2814348

Strand: Reverse

Name: 170756987

Synonym: CLD_1932

Alternate gene names: NA

Gene position: 2814348-2813740 (Counterclockwise)

Preceding gene: 170756214

Following gene: 170754665

Centisome position: 71.1

GC content: 25.45

Gene sequence:

>609_bases
ATGGTAAAGTTAACTTGGGGAATATGTAAAGAGGTGAGTATTATAAAAGAAATTGTTATTAATATGGAGAATGAAATTTT
TAGGGGCAATTTATTAGATGTAGGCACGGATAATTATGGAATAATATACAACATATATAAACAATATAATGAGGATTCAA
ACTTAGAATATATAAATGGAGCAGAGGAAAAGGAAAGCATAAAAGAAGGTTATTATGATAACTGTATTTTATTGTTTTCC
TTTAGCAATATATTTTTCAAAAAAAATAGGATGAATCTTATACAGGAGATATATAAGTACTTAAAGAACGGAGGAAATGT
TTATATTTGGGACATTGATAAAAAAATAAAGGAAACCTTTAACGGAAAAATAAAAATTTTATTGCCAGAAGAAAAAGTGA
AAAATATATCTATAAAGGATTTAAATGTGCTAAAAGATAGTTCTATAGATACTACTATAAAATTATTAGATCCTTATTTT
GAAATAAAAGATTTAAAATCTTCCGATGGAGTGTATTACATAAAAGGGAAGAAAAAAATAAATACTAATACCAAAGAGGA
CGAAAAGAGGAAGGAAGAAATTAATGAAAGCACTATTAGTAGCCATTAA

Upstream 100 bases:

>100_bases
TTAAGAATTATTTATATATAATGATTATTTTTAATATAAATAAAAAATCTTCTCCTTTGCTACAGTTTGAAATTAAAATA
ATTATTTTGATTATAAAAAA

Downstream 100 bases:

>100_bases
CTCTAAATATATTCATAGCAATTTAGCTCTTAGATATTTAAGAGCTAATACAGAGGATTTAAATTATGAGTGTGTGTTAA
AAGAATTTACCATAAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MVKLTWGICKEVSIIKEIVINMENEIFRGNLLDVGTDNYGIIYNIYKQYNEDSNLEYINGAEEKESIKEGYYDNCILLFS
FSNIFFKKNRMNLIQEIYKYLKNGGNVYIWDIDKKIKETFNGKIKILLPEEKVKNISIKDLNVLKDSSIDTTIKLLDPYF
EIKDLKSSDGVYYIKGKKKINTNTKEDEKRKEEINESTISSH

Sequences:

>Translated_202_residues
MVKLTWGICKEVSIIKEIVINMENEIFRGNLLDVGTDNYGIIYNIYKQYNEDSNLEYINGAEEKESIKEGYYDNCILLFS
FSNIFFKKNRMNLIQEIYKYLKNGGNVYIWDIDKKIKETFNGKIKILLPEEKVKNISIKDLNVLKDSSIDTTIKLLDPYF
EIKDLKSSDGVYYIKGKKKINTNTKEDEKRKEEINESTISSH
>Mature_202_residues
MVKLTWGICKEVSIIKEIVINMENEIFRGNLLDVGTDNYGIIYNIYKQYNEDSNLEYINGAEEKESIKEGYYDNCILLFS
FSNIFFKKNRMNLIQEIYKYLKNGGNVYIWDIDKKIKETFNGKIKILLPEEKVKNISIKDLNVLKDSSIDTTIKLLDPYF
EIKDLKSSDGVYYIKGKKKINTNTKEDEKRKEEINESTISSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23687; Mature: 23687

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLTWGICKEVSIIKEIVINMENEIFRGNLLDVGTDNYGIIYNIYKQYNEDSNLEYING
CEEECHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCEEEEEEHHHCCCCCCCEEECC
AEEKESIKEGYYDNCILLFSFSNIFFKKNRMNLIQEIYKYLKNGGNVYIWDIDKKIKETF
CHHHHHHHCCCCCCEEEEEEECCCEEECHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
NGKIKILLPEEKVKNISIKDLNVLKDSSIDTTIKLLDPYFEIKDLKSSDGVYYIKGKKKI
CCEEEEEECHHHHCCCCCCCCCEECCCCCCCEEEECCCHHHHHCCCCCCCEEEEECCEEE
NTNTKEDEKRKEEINESTISSH
CCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVKLTWGICKEVSIIKEIVINMENEIFRGNLLDVGTDNYGIIYNIYKQYNEDSNLEYING
CEEECHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCEEEEEEHHHCCCCCCCEEECC
AEEKESIKEGYYDNCILLFSFSNIFFKKNRMNLIQEIYKYLKNGGNVYIWDIDKKIKETF
CHHHHHHHCCCCCCEEEEEEECCCEEECHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
NGKIKILLPEEKVKNISIKDLNVLKDSSIDTTIKLLDPYFEIKDLKSSDGVYYIKGKKKI
CCEEEEEECHHHHCCCCCCCCCEECCCCCCCEEEECCCHHHHHCCCCCCCEEEEECCEEE
NTNTKEDEKRKEEINESTISSH
CCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA