| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756904
Identifier: 170756904
GI number: 170756904
Start: 2852176
End: 2852520
Strand: Reverse
Name: 170756904
Synonym: CLD_1892
Alternate gene names: NA
Gene position: 2852520-2852176 (Counterclockwise)
Preceding gene: 170757746
Following gene: 170755153
Centisome position: 72.07
GC content: 22.61
Gene sequence:
>345_bases GTGAAGAGCAATAGCAGTAATATAATGATAGAAGAAGCACTAATAAGAAAAATGCTTTCTGAATTAAAAGATATTCAAGC CCTTAGCTCAGAAAGATTGCTTCAACAAAAAATAGATTTACTTATAAAATATATGGAAAATATAGTTAAATATAAAAATG ATGAACCTTTTGAAGATACAATTTATAAAAAAATGAAAGAAGTAAGACTTGATAATCCAGAATTAAATTCTAAATTATAT ATACTATATAGAAAGCTTTCTGATGGAAAAATTACTGAAGAAGATGCAAGAATTTTATATGATGTGTATATTAAAAGTCA AGTTTATGATAAATTAATATATTAA
Upstream 100 bases:
>100_bases AATAATGTATTAAATATTATTAAACAAATTGTTAATTGTTAAAGTATATAAGTTTTTAAGTGATATAATTATGTTAATGG CTTATTAGGTGGTGTGATAG
Downstream 100 bases:
>100_bases TAATATAAAGGTGGTATCTTTAATGGAAGACAAGTGTTTAGAAATCAGTAAAGAATCAGTAAAAAAGATTTTATCTAGTT TAAATGAAATAAAAATACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDTIYKKMKEVRLDNPELNSKLY ILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY
Sequences:
>Translated_114_residues MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDTIYKKMKEVRLDNPELNSKLY ILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY >Mature_114_residues MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDTIYKKMKEVRLDNPELNSKLY ILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13662; Mature: 13662
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH IYKKMKEVRLDNPELNSKLYILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH IYKKMKEVRLDNPELNSKLYILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA