Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756904

Identifier: 170756904

GI number: 170756904

Start: 2852176

End: 2852520

Strand: Reverse

Name: 170756904

Synonym: CLD_1892

Alternate gene names: NA

Gene position: 2852520-2852176 (Counterclockwise)

Preceding gene: 170757746

Following gene: 170755153

Centisome position: 72.07

GC content: 22.61

Gene sequence:

>345_bases
GTGAAGAGCAATAGCAGTAATATAATGATAGAAGAAGCACTAATAAGAAAAATGCTTTCTGAATTAAAAGATATTCAAGC
CCTTAGCTCAGAAAGATTGCTTCAACAAAAAATAGATTTACTTATAAAATATATGGAAAATATAGTTAAATATAAAAATG
ATGAACCTTTTGAAGATACAATTTATAAAAAAATGAAAGAAGTAAGACTTGATAATCCAGAATTAAATTCTAAATTATAT
ATACTATATAGAAAGCTTTCTGATGGAAAAATTACTGAAGAAGATGCAAGAATTTTATATGATGTGTATATTAAAAGTCA
AGTTTATGATAAATTAATATATTAA

Upstream 100 bases:

>100_bases
AATAATGTATTAAATATTATTAAACAAATTGTTAATTGTTAAAGTATATAAGTTTTTAAGTGATATAATTATGTTAATGG
CTTATTAGGTGGTGTGATAG

Downstream 100 bases:

>100_bases
TAATATAAAGGTGGTATCTTTAATGGAAGACAAGTGTTTAGAAATCAGTAAAGAATCAGTAAAAAAGATTTTATCTAGTT
TAAATGAAATAAAAATACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDTIYKKMKEVRLDNPELNSKLY
ILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY

Sequences:

>Translated_114_residues
MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDTIYKKMKEVRLDNPELNSKLY
ILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY
>Mature_114_residues
MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDTIYKKMKEVRLDNPELNSKLY
ILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13662; Mature: 13662

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IYKKMKEVRLDNPELNSKLYILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY
HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSNSSNIMIEEALIRKMLSELKDIQALSSERLLQQKIDLLIKYMENIVKYKNDEPFEDT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IYKKMKEVRLDNPELNSKLYILYRKLSDGKITEEDARILYDVYIKSQVYDKLIY
HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA