| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756867
Identifier: 170756867
GI number: 170756867
Start: 750748
End: 751290
Strand: Direct
Name: 170756867
Synonym: CLD_0129
Alternate gene names: NA
Gene position: 750748-751290 (Clockwise)
Preceding gene: 170754458
Following gene: 170755268
Centisome position: 18.97
GC content: 30.57
Gene sequence:
>543_bases ATGAATATTTCATTAATATCTAGTATGGTTATATCTATGCTGATCGCCGAAGAAAAAGAAAAAAATACCCTCAGAACTCT TATACTTTCTGCTGTATCACCCTGGGAGTTCCTAACTGGCAAAGTTCTTATAACTTTTTTAGTGTCAGAAGTTATAAATA TAGCAATATTTTTTTCTATTGGTTGTGATATTCAATATTTAGGCAAATATATACTAATAACTACCTTAGTACTTTTCAGT ATGATAGAAATTGGGGCTATAATTGGAATCATTTCTCCAAATCAAATGGCTACAGGAGTTTTTAGTATGCCTGTAGTTAT GATCTTTTTTGTAATACCAATGTTTGCAAAAGCAAATAAAACAATAGAAGCAATAGCAAAATTTTTACCTAGTTATCATA TGAATATTATGATAGCAAGGCTATTTAAAGGGGAAACCTTTGGCATTGAATCTACCCGCAGCATAGCTATAATTTTGGCT TGGATAATAATTGCTGTAATTGCTTTTGCCTTTACCTATAACAAAAGGGGATTAGATAAGTAA
Upstream 100 bases:
>100_bases TCTACCAATCCTGTTTAGTATTATATATTCAAAATTATTAGGGAACAATTCCTCAAATGACGTTATGAATACGATAAATA TATTAATTTTATGAGTAGGC
Downstream 100 bases:
>100_bases AATTTAAAATTAACTAATATAAATGTGGAATCCCAGTAATAATAAAGCTGTTGCTGGGATTCCATATGAGTGAATATTTA TTTTTTATCTATATCTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-2 Type Transporter; ABC Transporter Permease Component
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MNISLISSMVISMLIAEEKEKNTLRTLILSAVSPWEFLTGKVLITFLVSEVINIAIFFSIGCDIQYLGKYILITTLVLFS MIEIGAIIGIISPNQMATGVFSMPVVMIFFVIPMFAKANKTIEAIAKFLPSYHMNIMIARLFKGETFGIESTRSIAIILA WIIIAVIAFAFTYNKRGLDK
Sequences:
>Translated_180_residues MNISLISSMVISMLIAEEKEKNTLRTLILSAVSPWEFLTGKVLITFLVSEVINIAIFFSIGCDIQYLGKYILITTLVLFS MIEIGAIIGIISPNQMATGVFSMPVVMIFFVIPMFAKANKTIEAIAKFLPSYHMNIMIARLFKGETFGIESTRSIAIILA WIIIAVIAFAFTYNKRGLDK >Mature_180_residues MNISLISSMVISMLIAEEKEKNTLRTLILSAVSPWEFLTGKVLITFLVSEVINIAIFFSIGCDIQYLGKYILITTLVLFS MIEIGAIIGIISPNQMATGVFSMPVVMIFFVIPMFAKANKTIEAIAKFLPSYHMNIMIARLFKGETFGIESTRSIAIILA WIIIAVIAFAFTYNKRGLDK
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20042; Mature: 20042
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISLISSMVISMLIAEEKEKNTLRTLILSAVSPWEFLTGKVLITFLVSEVINIAIFFSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GCDIQYLGKYILITTLVLFSMIEIGAIIGIISPNQMATGVFSMPVVMIFFVIPMFAKANK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH TIEAIAKFLPSYHMNIMIARLFKGETFGIESTRSIAIILAWIIIAVIAFAFTYNKRGLDK HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNISLISSMVISMLIAEEKEKNTLRTLILSAVSPWEFLTGKVLITFLVSEVINIAIFFSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GCDIQYLGKYILITTLVLFSMIEIGAIIGIISPNQMATGVFSMPVVMIFFVIPMFAKANK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH TIEAIAKFLPSYHMNIMIARLFKGETFGIESTRSIAIILAWIIIAVIAFAFTYNKRGLDK HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA