| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is coaE
Identifier: 170756834
GI number: 170756834
Start: 3261280
End: 3261918
Strand: Reverse
Name: coaE
Synonym: CLD_1532
Alternate gene names: 170756834
Gene position: 3261918-3261280 (Counterclockwise)
Preceding gene: 170754800
Following gene: 170756009
Centisome position: 82.41
GC content: 25.67
Gene sequence:
>639_bases ATGTATTGCTTAAAAAGTATTTTTAAAATTGGTCTTACAGGTGGTATAGGTGCTGGTAAAAGTACTATATCAGAAATGAT AAAAGAAAAAAATATACCAGTAATAGATGCGGATAAAATAAGCAGAGAGGTATTAAAGTTATATCCGGAAATTTTAATAA GGGTAAAAGAAGTTTTTGGTAAAGAATTTCTAGATGATAATGGCGATTTAAAAAGAAGAGAGTTTGGTAGTTATATATTT AAAAATAAAAATAAAAGAATAGAATATGAAAATATAATAATGCCTTATATAACAAGAGAAACCTTTAAAAGAATAAAATT ATTAGAGGAAAATAAAGAATCAATTTGTGTATTAGATGCCCCTACACTAATAGAACAGGGTTTATATAAATATATGGATA TAAATATATTAGTTTGGGTGGATAAAGATACACAAATAAATAGGGTTGTAAAAAGAGATGGCTTAAATAGAAGTGAAGTT ATGAATAGAATAAACTCTCAAATGTCTATGGAAGAAAAAAAGAAGTTTGTAGAATATATAATAGATAATTCTAAAGATAT AGAAAATACAAAGAATGAATTAGATAAGATTTTTATGGAAGTAATGATTAAAGCAAGGCAGAAGGGGGGAGTGCTCTAA
Upstream 100 bases:
>100_bases TAAAAAAAGAAATGGAACAGGTTTTAGAATTAAAAGTTGGGTTAGACGTGGATATAAATATAGGTAATAATTGGTATGAA GCAAAGTAAGGAGTTGTTTT
Downstream 100 bases:
>100_bases TATTAGGGCAAAAAAAAGTGAAGTTTTTAAGAAGACTTTTGATTTTAATATTAACAATTATTTTATTAATAAATATAACA ACTATAGCAAAATATATTTT
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MYCLKSIFKIGLTGGIGAGKSTISEMIKEKNIPVIDADKISREVLKLYPEILIRVKEVFGKEFLDDNGDLKRREFGSYIF KNKNKRIEYENIIMPYITRETFKRIKLLEENKESICVLDAPTLIEQGLYKYMDINILVWVDKDTQINRVVKRDGLNRSEV MNRINSQMSMEEKKKFVEYIIDNSKDIENTKNELDKIFMEVMIKARQKGGVL
Sequences:
>Translated_212_residues MYCLKSIFKIGLTGGIGAGKSTISEMIKEKNIPVIDADKISREVLKLYPEILIRVKEVFGKEFLDDNGDLKRREFGSYIF KNKNKRIEYENIIMPYITRETFKRIKLLEENKESICVLDAPTLIEQGLYKYMDINILVWVDKDTQINRVVKRDGLNRSEV MNRINSQMSMEEKKKFVEYIIDNSKDIENTKNELDKIFMEVMIKARQKGGVL >Mature_212_residues MYCLKSIFKIGLTGGIGAGKSTISEMIKEKNIPVIDADKISREVLKLYPEILIRVKEVFGKEFLDDNGDLKRREFGSYIF KNKNKRIEYENIIMPYITRETFKRIKLLEENKESICVLDAPTLIEQGLYKYMDINILVWVDKDTQINRVVKRDGLNRSEV MNRINSQMSMEEKKKFVEYIIDNSKDIENTKNELDKIFMEVMIKARQKGGVL
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=197, Percent_Identity=34.5177664974619, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI191252795, Length=197, Percent_Identity=34.5177664974619, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI110227607, Length=195, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI205277394, Length=195, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI110227605, Length=195, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI110227603, Length=195, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI110227601, Length=195, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=9e-17, Organism=Escherichia coli, GI1786292, Length=200, Percent_Identity=28, Blast_Score=87, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17554944, Length=194, Percent_Identity=34.5360824742268, Blast_Score=134, Evalue=3e-32, Organism=Caenorhabditis elegans, GI25143409, Length=196, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320402, Length=194, Percent_Identity=31.9587628865979, Blast_Score=104, Evalue=1e-23, Organism=Drosophila melanogaster, GI24644728, Length=193, Percent_Identity=34.7150259067358, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI24658602, Length=197, Percent_Identity=26.3959390862944, Blast_Score=78, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 24817; Mature: 24817
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCLKSIFKIGLTGGIGAGKSTISEMIKEKNIPVIDADKISREVLKLYPEILIRVKEVFG CHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH KEFLDDNGDLKRREFGSYIFKNKNKRIEYENIIMPYITRETFKRIKLLEENKESICVLDA HHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC PTLIEQGLYKYMDINILVWVDKDTQINRVVKRDGLNRSEVMNRINSQMSMEEKKKFVEYI HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IDNSKDIENTKNELDKIFMEVMIKARQKGGVL HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYCLKSIFKIGLTGGIGAGKSTISEMIKEKNIPVIDADKISREVLKLYPEILIRVKEVFG CHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH KEFLDDNGDLKRREFGSYIFKNKNKRIEYENIIMPYITRETFKRIKLLEENKESICVLDA HHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC PTLIEQGLYKYMDINILVWVDKDTQINRVVKRDGLNRSEVMNRINSQMSMEEKKKFVEYI HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IDNSKDIENTKNELDKIFMEVMIKARQKGGVL HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]