| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756829
Identifier: 170756829
GI number: 170756829
Start: 2766139
End: 2767155
Strand: Reverse
Name: 170756829
Synonym: CLD_1975
Alternate gene names: NA
Gene position: 2767155-2766139 (Counterclockwise)
Preceding gene: 170754420
Following gene: 170757830
Centisome position: 69.91
GC content: 25.66
Gene sequence:
>1017_bases ATGAATTACAATATGGAGGTTAGACGTTGTAAAAGTTGTATTTTACCTGAAGTCCCAGGACATGTAGAGTTAGATAGTAA TGGTATATGCAATATTTGCAATGGAGATAAACGTACAATAAACAAAGAAAATAATTCTAAGAAAGGGTGCGATCTGGATT ATTTTAAAGAAAAAATTTTATTTTATGATAAAAAAAATAGTAAGTATAATTGTGTAGTAAGTGTTTCGGGAGGAAAAGAT AGCATTATGACATTATATGTTGCAAAAAAGATATTGAACCTTAATGTTTTAGCTATTTTTATAGATAATGGTTTTGCTTT ACCGGAGATGTATGATAATTTAAATAATGCAACAGATATTTTGAATGTAGATATGATGATTTTTAAAACCTCTGACATGA TAGATATTTTTAAAAAATGTATAGAATCTAAGAAAGATATATATTATTGTAGGGTATGTCATACTTTATTAGAGTACTAT ATAAAAAGTATTTGTGTTCAAAATAATATTAATGTAATTTTGGGAGGATATACAAAGGGACAGCAATATATAAAAAATTC AGAATTATTTTGGATTTATGAAAAGTCTGATTATAATATTATTGAATTGTTTAAAAATGATAAAAAATTTAGTGAATTAT CAGCTATTTTTCAGAGCCCAATAAAATATATGACTGAAAAGTTTGGAAATATTGTTCAACTTTCTCCATTTAAATATATG ACATGGAATGAGAATGAAATATTAAATATTATAACAGAAGAGTTGAAATTTAAAATTTCTAAAAATAGTTGGCCTGACAA ATCATCAAATTGTATGTTTAATTATGTGTCTCAATTAAAAACTATGAAACAGTTTGGTTATGCTCAGCATGAAACAGAGT TAAGTGATCTTGTAAGAGAAGGTGAGTTATCGAGACAACGTGCATTAGAAATCATAAGAACACCTATAGAAGAAGAAAAT TTGAAAAAACCACTTTTAAAGCTGGGATTGTGTATAGATGATATTCTTAATTATTAG
Upstream 100 bases:
>100_bases CTTATGCATTACTATCACAAAAAGGATTGAACATTGATAAATGGGATTTTGAAACTATTAAAGAGATAGAAAAATACAGT AAATTAAGGAGTAATGAAAA
Downstream 100 bases:
>100_bases GAGGAAAAATGAATATAAAAAATCAAATCAAAGATATTTTAAAAAAGAACATTTTTGAACTAGAAGATGTTGAAATAAGT GATGAATTAGAGCTTATATC
Product: hypothetical protein
Products: NA
Alternate protein names: N-Acetyl Sugar Amidotransferase; ATPase; PP-Loop
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MNYNMEVRRCKSCILPEVPGHVELDSNGICNICNGDKRTINKENNSKKGCDLDYFKEKILFYDKKNSKYNCVVSVSGGKD SIMTLYVAKKILNLNVLAIFIDNGFALPEMYDNLNNATDILNVDMMIFKTSDMIDIFKKCIESKKDIYYCRVCHTLLEYY IKSICVQNNINVILGGYTKGQQYIKNSELFWIYEKSDYNIIELFKNDKKFSELSAIFQSPIKYMTEKFGNIVQLSPFKYM TWNENEILNIITEELKFKISKNSWPDKSSNCMFNYVSQLKTMKQFGYAQHETELSDLVREGELSRQRALEIIRTPIEEEN LKKPLLKLGLCIDDILNY
Sequences:
>Translated_338_residues MNYNMEVRRCKSCILPEVPGHVELDSNGICNICNGDKRTINKENNSKKGCDLDYFKEKILFYDKKNSKYNCVVSVSGGKD SIMTLYVAKKILNLNVLAIFIDNGFALPEMYDNLNNATDILNVDMMIFKTSDMIDIFKKCIESKKDIYYCRVCHTLLEYY IKSICVQNNINVILGGYTKGQQYIKNSELFWIYEKSDYNIIELFKNDKKFSELSAIFQSPIKYMTEKFGNIVQLSPFKYM TWNENEILNIITEELKFKISKNSWPDKSSNCMFNYVSQLKTMKQFGYAQHETELSDLVREGELSRQRALEIIRTPIEEEN LKKPLLKLGLCIDDILNY >Mature_338_residues MNYNMEVRRCKSCILPEVPGHVELDSNGICNICNGDKRTINKENNSKKGCDLDYFKEKILFYDKKNSKYNCVVSVSGGKD SIMTLYVAKKILNLNVLAIFIDNGFALPEMYDNLNNATDILNVDMMIFKTSDMIDIFKKCIESKKDIYYCRVCHTLLEYY IKSICVQNNINVILGGYTKGQQYIKNSELFWIYEKSDYNIIELFKNDKKFSELSAIFQSPIKYMTEKFGNIVQLSPFKYM TWNENEILNIITEELKFKISKNSWPDKSSNCMFNYVSQLKTMKQFGYAQHETELSDLVREGELSRQRALEIIRTPIEEEN LKKPLLKLGLCIDDILNY
Specific function: Unknown
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39433; Mature: 39433
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYNMEVRRCKSCILPEVPGHVELDSNGICNICNGDKRTINKENNSKKGCDLDYFKEKIL CCCCCHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHE FYDKKNSKYNCVVSVSGGKDSIMTLYVAKKILNLNVLAIFIDNGFALPEMYDNLNNATDI EEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHCCCCHHHH LNVDMMIFKTSDMIDIFKKCIESKKDIYYCRVCHTLLEYYIKSICVQNNINVILGGYTKG EEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC QQYIKNSELFWIYEKSDYNIIELFKNDKKFSELSAIFQSPIKYMTEKFGNIVQLSPFKYM HHHHCCCCEEEEEECCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEE TWNENEILNIITEELKFKISKNSWPDKSSNCMFNYVSQLKTMKQFGYAQHETELSDLVRE ECCCCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GELSRQRALEIIRTPIEEENLKKPLLKLGLCIDDILNY CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNYNMEVRRCKSCILPEVPGHVELDSNGICNICNGDKRTINKENNSKKGCDLDYFKEKIL CCCCCHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHE FYDKKNSKYNCVVSVSGGKDSIMTLYVAKKILNLNVLAIFIDNGFALPEMYDNLNNATDI EEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHCCCCHHHH LNVDMMIFKTSDMIDIFKKCIESKKDIYYCRVCHTLLEYYIKSICVQNNINVILGGYTKG EEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC QQYIKNSELFWIYEKSDYNIIELFKNDKKFSELSAIFQSPIKYMTEKFGNIVQLSPFKYM HHHHCCCCEEEEEECCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEE TWNENEILNIITEELKFKISKNSWPDKSSNCMFNYVSQLKTMKQFGYAQHETELSDLVRE ECCCCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GELSRQRALEIIRTPIEEENLKKPLLKLGLCIDDILNY CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA