| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756807
Identifier: 170756807
GI number: 170756807
Start: 562119
End: 562808
Strand: Direct
Name: 170756807
Synonym: CLD_0299
Alternate gene names: NA
Gene position: 562119-562808 (Clockwise)
Preceding gene: 170754511
Following gene: 170756150
Centisome position: 14.2
GC content: 26.23
Gene sequence:
>690_bases ATGTATAAAAAGTTAAAAGATGAACGTATTGTAAAAGAAGCTAATAAAGTTATTGCTCCTATGTATGTGTTAATACTTGC TTTAACATGCATAGTTGCAATAATTAAGTACATATTTTTTACCCAGGAAATTTCTAACTATATTTTAGAATTAGTAGCAA CAATAGGGGCTATGGGATATTTGACTTTTATATCTATAATCAATCATATTCCCATTTTTTATTCAAAAGATCAATGTATA AGAGAATTGCAAAATAAATATCGTACGCATAGTTTCAATATTTGCTTTTGGGTATATATTGTTGGTGAATTTATTTTATT ATTAATACAAGGAGAAGAATTTTATAAAATAGTAGGTTTCTATCTTTTGATTTGGTTCATACCAAGTATTATTATCACTA GAAAATTAATAAAAAAAGGACTTTTTGTTTGGGGGAGTAAAAAGAAAGAAAAAAATGGGATAGAATCATTTAGAAAACAC TGCATATTAGGTAGTTTATTTTATGGGATTTTTATGAAATGGGATTCAGTATGGAAAGATGGAATTTTTAATCCAAAGGG AATATTATACATTCTTGGAATGGCTGCATTTTGGGGAATACCTTTTTATTTTATTATGAAACTTCTGATATCTAATTCAG AAAAAAATTCTGATAGGGAATTAGAAAAGGCTGAAAAGTATGATGGATAA
Upstream 100 bases:
>100_bases TTGAAAAATGCAATATATAAATTACATTATAGCTTATATAATTTACTTTTAACAATATATGTTATATAATATTGGTAAAT TATATAAGGAGTGAGCACTT
Downstream 100 bases:
>100_bases AGGAGAAAGGTTAGGAAAATGAAAAATAAAAAAATGAAAATTGCCCGTATTGAGTGTGATATGTCACAAGAGCAACTAGC TGATGCTATAGGTGTTACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MYKKLKDERIVKEANKVIAPMYVLILALTCIVAIIKYIFFTQEISNYILELVATIGAMGYLTFISIINHIPIFYSKDQCI RELQNKYRTHSFNICFWVYIVGEFILLLIQGEEFYKIVGFYLLIWFIPSIIITRKLIKKGLFVWGSKKKEKNGIESFRKH CILGSLFYGIFMKWDSVWKDGIFNPKGILYILGMAAFWGIPFYFIMKLLISNSEKNSDRELEKAEKYDG
Sequences:
>Translated_229_residues MYKKLKDERIVKEANKVIAPMYVLILALTCIVAIIKYIFFTQEISNYILELVATIGAMGYLTFISIINHIPIFYSKDQCI RELQNKYRTHSFNICFWVYIVGEFILLLIQGEEFYKIVGFYLLIWFIPSIIITRKLIKKGLFVWGSKKKEKNGIESFRKH CILGSLFYGIFMKWDSVWKDGIFNPKGILYILGMAAFWGIPFYFIMKLLISNSEKNSDRELEKAEKYDG >Mature_229_residues MYKKLKDERIVKEANKVIAPMYVLILALTCIVAIIKYIFFTQEISNYILELVATIGAMGYLTFISIINHIPIFYSKDQCI RELQNKYRTHSFNICFWVYIVGEFILLLIQGEEFYKIVGFYLLIWFIPSIIITRKLIKKGLFVWGSKKKEKNGIESFRKH CILGSLFYGIFMKWDSVWKDGIFNPKGILYILGMAAFWGIPFYFIMKLLISNSEKNSDRELEKAEKYDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26919; Mature: 26919
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKKLKDERIVKEANKVIAPMYVLILALTCIVAIIKYIFFTQEISNYILELVATIGAMGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFISIINHIPIFYSKDQCIRELQNKYRTHSFNICFWVYIVGEFILLLIQGEEFYKIVGF HHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH YLLIWFIPSIIITRKLIKKGLFVWGSKKKEKNGIESFRKHCILGSLFYGIFMKWDSVWKD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIFNPKGILYILGMAAFWGIPFYFIMKLLISNSEKNSDRELEKAEKYDG CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MYKKLKDERIVKEANKVIAPMYVLILALTCIVAIIKYIFFTQEISNYILELVATIGAMGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFISIINHIPIFYSKDQCIRELQNKYRTHSFNICFWVYIVGEFILLLIQGEEFYKIVGF HHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH YLLIWFIPSIIITRKLIKKGLFVWGSKKKEKNGIESFRKHCILGSLFYGIFMKWDSVWKD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIFNPKGILYILGMAAFWGIPFYFIMKLLISNSEKNSDRELEKAEKYDG CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA