| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is pyrG
Identifier: 170756802
GI number: 170756802
Start: 169409
End: 171010
Strand: Direct
Name: pyrG
Synonym: CLD_0654
Alternate gene names: 170756802
Gene position: 169409-171010 (Clockwise)
Preceding gene: 170755608
Following gene: 170757224
Centisome position: 4.28
GC content: 31.71
Gene sequence:
>1602_bases ATGAGCACTAAATATATATTTGTAACAGGTGGCGTTGTTTCTTCATTAGGGAAAGGAATAACAGCAGCTTCTTTAGGAAG ACTTTTAAAAAATAGAGGACTTAAAGTTTCAATACAAAAATTTGATCCATATATAAATATAGATCCAGGAACAATGAGTC CTTATCAACATGGTGAAGTATTTGTAACAGAAGATGGTACAGAAACAGATTTAGATTTAGGCCATTATGAAAGGTTTATA GATGAAAATTTAAGTCAAAACAGTAATGTAACTACAGGAAAGATTTACTGGTCTGTTATATCTAAAGAAAGAAAAGGTGA TTATTTAGGTGCTACAGTGCAGGTAATACCTCATATAACTACAGAAATAAAATCTAGAGTATATAGAGTCGCTAAAGAAA AAGAAGTAGATGTAGTTATAACTGAAATAGGTGGAACTATAGGAGATATAGAATCTCTACCTTTTTTAGAATCAATAAGG CAAATCAAATATGAGGTTGGAAGAGAAAATGTATGCTTTATTCATGTAACCTTACTACCCTTTCTAGGAAAAGCAGGTGA GTTAAAGACAAAGCCTACACAACACTCAGTTAAAGAACTTAGAGGAATAGGGATACAGCCAGATATCATAGTTTGTCGAT CAGAAAAACAGATACCAGAGGAACTAAAGGGGAAAATAGGATTATTTTGTAATGTAGATAAAGAAGATGTCATACAAAAT TTAGACGCAGAAAATCTTTATGAAGTACCATTAATGCTACATAAGGAAAATTTAGATGCTTTAGTATGTAAGAAATTAGG CCTAAATTATAGTAAAATAGATAACACGGAATGGATATCAATGGTAAATAATGCAAAAAACCTTTCTAAGAATACTACCA TAGCTTTGGTAGGGAAGTATGTAGAATTACATGATGCTTATATATCAATAGTGGAAGCTTTAAACCATGGTGGTTATGCT AATGATACTAAAGTAAATATAAAATGGATAAATTCTGAAGAGATAAATGAAAATAACTTTGAACAATATTTAAAAGATGT GGATGGTATATTGGTACCAGGTGGATTTGGTGATAGAGGAATAGAAGGTAAAATATGGGCTGCTAAATGGGCAAGGGAAA ATAAGATACCTTTTTTAGGGATATGTCTTGGAATGCAATGTGCAGTAATAGAGTTTGCCAGAAATGTATTAAATTATAAA GGAGCTCATAGTGCAGAGATAAATCCAAATACAAAATATCCAGTAATAGATTTAATGCCAGAACAGAAGGATATAGATAA TATGGGTGGAACTATGAGATTGGGAGCGTATCCTTGTAAATTACTTAAGGGTACAAATTCAGAAAAAGCTTATGGTCAGG AGATTGTATATGAAAGGCATAGGCATAGATATGAATTTAATAATGAATATAGGAGTAAACTAACAGAAGCGGGTTTAATA TTGTCAGGAACAAGTCCAGACGATAGATTAGTGGAGATAGTAGAGATAAATAATCATCCTTGGTATGTGGCTGTTCAATT TCACCCAGAATTAAAATCAAGACCAAATAAGCCACATCCATTATTTAAAGACTTTGTAAAGGCCACTTTGGATAAAAAAT AA
Upstream 100 bases:
>100_bases AAATAATGTCAATAGATTTTATGTAAAATTAGTGCACAATAATACAAACTTAAACTTTGGAGGTGAAAACTGCTTTATTA TATATTAAAGCAGGGAAGAT
Downstream 100 bases:
>100_bases ATTTTATATACTAGTTAAAATTTAATATATGTTAATAAAAAACACCATCAGAATTTATAAAAATAAATAATTTTGGTGTT GTTTTTTTATTTATCCGATG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MSTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEVFVTEDGTETDLDLGHYERFI DENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHITTEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIR QIKYEVGRENVCFIHVTLLPFLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQN LDAENLYEVPLMLHKENLDALVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKYVELHDAYISIVEALNHGGYA NDTKVNIKWINSEEINENNFEQYLKDVDGILVPGGFGDRGIEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYK GAHSAEINPNTKYPVIDLMPEQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEIVYERHRHRYEFNNEYRSKLTEAGLI LSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKDFVKATLDKK
Sequences:
>Translated_533_residues MSTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEVFVTEDGTETDLDLGHYERFI DENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHITTEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIR QIKYEVGRENVCFIHVTLLPFLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQN LDAENLYEVPLMLHKENLDALVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKYVELHDAYISIVEALNHGGYA NDTKVNIKWINSEEINENNFEQYLKDVDGILVPGGFGDRGIEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYK GAHSAEINPNTKYPVIDLMPEQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEIVYERHRHRYEFNNEYRSKLTEAGLI LSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKDFVKATLDKK >Mature_532_residues STKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEVFVTEDGTETDLDLGHYERFID ENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHITTEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIRQ IKYEVGRENVCFIHVTLLPFLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQNL DAENLYEVPLMLHKENLDALVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKYVELHDAYISIVEALNHGGYAN DTKVNIKWINSEEINENNFEQYLKDVDGILVPGGFGDRGIEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYKG AHSAEINPNTKYPVIDLMPEQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEIVYERHRHRYEFNNEYRSKLTEAGLIL SGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKDFVKATLDKK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=551, Percent_Identity=47.9128856624319, Blast_Score=502, Evalue=1e-142, Organism=Homo sapiens, GI28559085, Length=548, Percent_Identity=49.0875912408759, Blast_Score=501, Evalue=1e-142, Organism=Homo sapiens, GI28559083, Length=548, Percent_Identity=49.0875912408759, Blast_Score=501, Evalue=1e-142, Organism=Homo sapiens, GI221316689, Length=548, Percent_Identity=49.0875912408759, Blast_Score=501, Evalue=1e-142, Organism=Escherichia coli, GI1789142, Length=539, Percent_Identity=55.6586270871985, Blast_Score=606, Evalue=1e-174, Organism=Caenorhabditis elegans, GI25148299, Length=593, Percent_Identity=38.7858347386172, Blast_Score=414, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319432, Length=558, Percent_Identity=45.3405017921147, Blast_Score=475, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6322563, Length=560, Percent_Identity=45.1785714285714, Blast_Score=467, Evalue=1e-132, Organism=Drosophila melanogaster, GI24664469, Length=550, Percent_Identity=48.5454545454545, Blast_Score=506, Evalue=1e-143, Organism=Drosophila melanogaster, GI21357815, Length=495, Percent_Identity=46.6666666666667, Blast_Score=431, Evalue=1e-121,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60033; Mature: 59902
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEV CCCEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCEE FVTEDGTETDLDLGHYERFIDENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHIT EEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEHEEEEEEHHHHCCCCCCCCHHHHHHHHH TEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIRQIKYEVGRENVCFIHVTLLP HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHH FLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQN HCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHCCCEEEEEECCHHHHHHC LDAENLYEVPLMLHKENLDALVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKY CCCCCEECCCEEEECCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEEEHH VELHDAYISIVEALNHGGYANDTKVNIKWINSEEINENNFEQYLKDVDGILVPGGFGDRG HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEECCCCCCCC IEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYKGAHSAEINPNTKYPVIDLMP CCCCEEEEECCCCCCCCEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC EQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEIVYERHRHRYEFNNEYRSKLTEAGLI CCCCHHHCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEE LSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKDFVKATLDKK EECCCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure STKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEV CCEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCEE FVTEDGTETDLDLGHYERFIDENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHIT EEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEHEEEEEEHHHHCCCCCCCCHHHHHHHHH TEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIRQIKYEVGRENVCFIHVTLLP HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHH FLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQN HCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHCCCEEEEEECCHHHHHHC LDAENLYEVPLMLHKENLDALVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKY CCCCCEECCCEEEECCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEEEHH VELHDAYISIVEALNHGGYANDTKVNIKWINSEEINENNFEQYLKDVDGILVPGGFGDRG HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEECCCCCCCC IEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYKGAHSAEINPNTKYPVIDLMP CCCCEEEEECCCCCCCCEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC EQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEIVYERHRHRYEFNNEYRSKLTEAGLI CCCCHHHCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEE LSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKDFVKATLDKK EECCCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA