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The map label for this gene is ydaM [H]

Identifier: 170756796

GI number: 170756796

Start: 2663184

End: 2664458

Strand: Reverse

Name: ydaM [H]

Synonym: CLD_2099

Alternate gene names: 170756796

Gene position: 2664458-2663184 (Counterclockwise)

Preceding gene: 170756990

Following gene: 170757124

Centisome position: 67.31

GC content: 26.43

Gene sequence:

>1275_bases
TTGAATATTATAAATGGAATAGTTCATTATAGCTCTAAAGCAATAACATACATAGTTTATTTCATATCCATGTATTATCT
TATAATTTCTCTTTTTGGTATATATAGAAAAAAGAATAATAAGAATATTGGTGATAAAACGAAATTTGCTCTTATTGTAG
CAGCACATAATGAAGAACTAGTTATAGGTAACATAATAGAAAGCTTAAAAATGATGGATTATGATAAAAAGCTATATGAC
ATTTTTGTAATTGCAGATAATTGTACAGATAAAACTGCTGAGATTGCAAGAGAAAAAGGAGCTATTGTACGGGAAAGATT
TGACAAGAAACGAAGAGGAAAAGGTTATGCATTAGAATGGATGTTTAATATAATATTTAAAATGGAAAAAAAATATGATG
CCATAGCAGTGTTTGATGCAGATAATTTAGTTCATAAAAATTTTTTAAAAGAAATGAATAAAAAAATGTGTAAAGGATAT
AAGGTAGTTCAGGGTTATTTAGATAGTAAGAATCCTGAGGATACTTGGATAACAGGAAGTTATTCTATTGCATTTTGGAG
TTGTAATAGAATGTTCCAACTTGCAAGATATAATTTAGGATTATCTAGTCAATTGGGTGGCACTGGTTTTTGTATAGATA
CAGATATATTAAAAGAACTTGGTTGGGGTGCTACTTGTCTTACAGAGGATTTAGAGTTTTCTTGCAAAATTATATTAAAT
GGATACAAAGTGGGGTGGGCCCATGATGCCATAATATATGATGAAAAACCTTTAACCTTAGGTCAATCATGGAGGCAAAG
AAAAAGATGGATGCAAGGTTTTGCAGATGTATCTAGTAGATATTTTTTTAAGCTTATGAAAAAAGCTATTAAAAATTTTA
ATTTTACTGCTTTTGATTGTGCACTTTATAGTATACAACCTTTTGTAGCTATACTATTAGGTTTGTCAGCCATAATAGGT
TTATTTCAATATGTTATTAAAGCAACAAACATAGTTAATAATTTTAATAATATAGTTTATTCTATAGATTTTAATTTGAT
AACTATATTAATAATTTTATTTTCGCTGTTTCAAATATTATATACACCTTTAATATTGATTTTAGAAAAAAAATTTACAT
TTAAAGTGTTATTATATTATATAGTTTATCCTATATATGCTATAACGTGGTTTCCTATTTCAATACAAGGAATTATGGAT
AAAAACAATAAAGAATGGAGTCATACAATTCATACTAGAAGTATGAATATAGATGAACTAGAAAAAGTTAACTAG

Upstream 100 bases:

>100_bases
TTAAGTATGCATTAAGTAATTTATAATATTTATTTGCAATAATATATAGTAATTAACTAGTATTTATGCTAAAATATTTT
TGAACCGAGGGGGGATACTA

Downstream 100 bases:

>100_bases
AGGAAAGCATAGCTTTCCTTTTTTTGCTTTTTTTATGATGAATTTATAATGTATAAATTAAATAATAATTATAATAATTA
ATAATTTTAAGAGGAAATAG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MNIINGIVHYSSKAITYIVYFISMYYLIISLFGIYRKKNNKNIGDKTKFALIVAAHNEELVIGNIIESLKMMDYDKKLYD
IFVIADNCTDKTAEIAREKGAIVRERFDKKRRGKGYALEWMFNIIFKMEKKYDAIAVFDADNLVHKNFLKEMNKKMCKGY
KVVQGYLDSKNPEDTWITGSYSIAFWSCNRMFQLARYNLGLSSQLGGTGFCIDTDILKELGWGATCLTEDLEFSCKIILN
GYKVGWAHDAIIYDEKPLTLGQSWRQRKRWMQGFADVSSRYFFKLMKKAIKNFNFTAFDCALYSIQPFVAILLGLSAIIG
LFQYVIKATNIVNNFNNIVYSIDFNLITILIILFSLFQILYTPLILILEKKFTFKVLLYYIVYPIYAITWFPISIQGIMD
KNNKEWSHTIHTRSMNIDELEKVN

Sequences:

>Translated_424_residues
MNIINGIVHYSSKAITYIVYFISMYYLIISLFGIYRKKNNKNIGDKTKFALIVAAHNEELVIGNIIESLKMMDYDKKLYD
IFVIADNCTDKTAEIAREKGAIVRERFDKKRRGKGYALEWMFNIIFKMEKKYDAIAVFDADNLVHKNFLKEMNKKMCKGY
KVVQGYLDSKNPEDTWITGSYSIAFWSCNRMFQLARYNLGLSSQLGGTGFCIDTDILKELGWGATCLTEDLEFSCKIILN
GYKVGWAHDAIIYDEKPLTLGQSWRQRKRWMQGFADVSSRYFFKLMKKAIKNFNFTAFDCALYSIQPFVAILLGLSAIIG
LFQYVIKATNIVNNFNNIVYSIDFNLITILIILFSLFQILYTPLILILEKKFTFKVLLYYIVYPIYAITWFPISIQGIMD
KNNKEWSHTIHTRSMNIDELEKVN
>Mature_424_residues
MNIINGIVHYSSKAITYIVYFISMYYLIISLFGIYRKKNNKNIGDKTKFALIVAAHNEELVIGNIIESLKMMDYDKKLYD
IFVIADNCTDKTAEIAREKGAIVRERFDKKRRGKGYALEWMFNIIFKMEKKYDAIAVFDADNLVHKNFLKEMNKKMCKGY
KVVQGYLDSKNPEDTWITGSYSIAFWSCNRMFQLARYNLGLSSQLGGTGFCIDTDILKELGWGATCLTEDLEFSCKIILN
GYKVGWAHDAIIYDEKPLTLGQSWRQRKRWMQGFADVSSRYFFKLMKKAIKNFNFTAFDCALYSIQPFVAILLGLSAIIG
LFQYVIKATNIVNNFNNIVYSIDFNLITILIILFSLFQILYTPLILILEKKFTFKVLLYYIVYPIYAITWFPISIQGIMD
KNNKEWSHTIHTRSMNIDELEKVN

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 49324; Mature: 49324

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIINGIVHYSSKAITYIVYFISMYYLIISLFGIYRKKNNKNIGDKTKFALIVAAHNEEL
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCE
VIGNIIESLKMMDYDKKLYDIFVIADNCTDKTAEIAREKGAIVRERFDKKRRGKGYALEW
EHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH
MFNIIFKMEKKYDAIAVFDADNLVHKNFLKEMNKKMCKGYKVVQGYLDSKNPEDTWITGS
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
YSIAFWSCNRMFQLARYNLGLSSQLGGTGFCIDTDILKELGWGATCLTEDLEFSCKIILN
EEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHCCCCCEEECCCCCCEEEEEEE
GYKVGWAHDAIIYDEKPLTLGQSWRQRKRWMQGFADVSSRYFFKLMKKAIKNFNFTAFDC
CEEECEEECEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
ALYSIQPFVAILLGLSAIIGLFQYVIKATNIVNNFNNIVYSIDFNLITILIILFSLFQIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH
YTPLILILEKKFTFKVLLYYIVYPIYAITWFPISIQGIMDKNNKEWSHTIHTRSMNIDEL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHEEEECCCCHHHH
EKVN
HCCC
>Mature Secondary Structure
MNIINGIVHYSSKAITYIVYFISMYYLIISLFGIYRKKNNKNIGDKTKFALIVAAHNEEL
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCE
VIGNIIESLKMMDYDKKLYDIFVIADNCTDKTAEIAREKGAIVRERFDKKRRGKGYALEW
EHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH
MFNIIFKMEKKYDAIAVFDADNLVHKNFLKEMNKKMCKGYKVVQGYLDSKNPEDTWITGS
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
YSIAFWSCNRMFQLARYNLGLSSQLGGTGFCIDTDILKELGWGATCLTEDLEFSCKIILN
EEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHCCCCCEEECCCCCCEEEEEEE
GYKVGWAHDAIIYDEKPLTLGQSWRQRKRWMQGFADVSSRYFFKLMKKAIKNFNFTAFDC
CEEECEEECEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
ALYSIQPFVAILLGLSAIIGLFQYVIKATNIVNNFNNIVYSIDFNLITILIILFSLFQIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH
YTPLILILEKKFTFKVLLYYIVYPIYAITWFPISIQGIMDKNNKEWSHTIHTRSMNIDEL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHEEEECCCCHHHH
EKVN
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]