| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yeiH [C]
Identifier: 170756746
GI number: 170756746
Start: 449196
End: 450206
Strand: Direct
Name: yeiH [C]
Synonym: CLD_0388
Alternate gene names: 170756746
Gene position: 449196-450206 (Clockwise)
Preceding gene: 170757530
Following gene: 170755461
Centisome position: 11.35
GC content: 31.36
Gene sequence:
>1011_bases ATGGAAAGATTAAAAACTATATTACCAGGGATTTTGCTGTCATTTTTTATAGCTATGTTAGCAACTTGGCTTGGAAACTT ATTACCAGTAATAGGGGGAGCGGTGTTTGGAATAATAATAGGAATAATAATAAACAACATTATAGGTAAACCTAAAAATA CTATAGAAGGGGTAGCATTTACATCAAAAAAAGTATTACAATGGGCTATCATAGTTTTAGGGGCGGGACTAAGTTTATCA CAGGTTAGGAAAACAGGGCTAGAATCCCTAGAAGTTACTATATTTACAATAGCTACAGCTTTTATAACTGCTTATGTAGT TGGTAAGCTTTTTAAAATACCAGACAAACTAAAAACCTTAATAGGGGTAGGTACAGCTATATGTGGAGGTTCTGCTATTG CAGCTATATCTCCTATAATAGAAGCGGATGAAGTAGAGATAGCTTACTCTATATCAACTATATTTTTATTTAATATAATA GCTGTTTTAATATTTCCACCATTAGGTCATCTATTAGGATTTTCAGATAAAGCCTTTGGGTTATGGGCAGGAACAGCCAT AAATGATACCTCCTCTGTAGTAGCGGCAGGGTATGCTTTTAGTAATAAGGCAGGAGAATATGCAACTATAGTTAAATTAA CAAGAGCTACTTTAATAATACCAATATCATTAATATTTGCATTCATAACAGCCTATAAAAAGAAAAAGGAAGCTGAAATG GGAACGGGAGAAGTTAATTATTCATTTAAAAAAATATTCCCATGGTTCATATTATGGTTTTTAGTAGCATCTTTGTTAAA TACTATGGGACTATTTAAAGGAAATACAATTCATTATATAAATGAGTTAGGAAAATTTTTAATAGTAATGGCTCTATCAG CTATAGGACTAAGTTCAAACTTTAAAGATATGACCAAGGCCGGATTTAAACCAATACTTTTAGGAGTTATAGTATGGTTT AATGTAGCAGTAGTAAGTATAATAATACAATTTATAACAGGGCAAATATAA
Upstream 100 bases:
>100_bases TTTAACTGTAAAAAATATAAAATAATAAAAGGAAAGGGAAATAATAATATTAGTTTATATTTAAAATTAAAAATCACAAG ATAAAATGGGAGATGAAAAA
Downstream 100 bases:
>100_bases GGAAAGTGCGACGCACTTTCCTTATTTATATTAAGAAAGAGTTAAGGATTAAGAAAAGCTTTTATTAAGATATTTTAAGT ATAATTATTATATAAGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MERLKTILPGILLSFFIAMLATWLGNLLPVIGGAVFGIIIGIIINNIIGKPKNTIEGVAFTSKKVLQWAIIVLGAGLSLS QVRKTGLESLEVTIFTIATAFITAYVVGKLFKIPDKLKTLIGVGTAICGGSAIAAISPIIEADEVEIAYSISTIFLFNII AVLIFPPLGHLLGFSDKAFGLWAGTAINDTSSVVAAGYAFSNKAGEYATIVKLTRATLIIPISLIFAFITAYKKKKEAEM GTGEVNYSFKKIFPWFILWFLVASLLNTMGLFKGNTIHYINELGKFLIVMALSAIGLSSNFKDMTKAGFKPILLGVIVWF NVAVVSIIIQFITGQI
Sequences:
>Translated_336_residues MERLKTILPGILLSFFIAMLATWLGNLLPVIGGAVFGIIIGIIINNIIGKPKNTIEGVAFTSKKVLQWAIIVLGAGLSLS QVRKTGLESLEVTIFTIATAFITAYVVGKLFKIPDKLKTLIGVGTAICGGSAIAAISPIIEADEVEIAYSISTIFLFNII AVLIFPPLGHLLGFSDKAFGLWAGTAINDTSSVVAAGYAFSNKAGEYATIVKLTRATLIIPISLIFAFITAYKKKKEAEM GTGEVNYSFKKIFPWFILWFLVASLLNTMGLFKGNTIHYINELGKFLIVMALSAIGLSSNFKDMTKAGFKPILLGVIVWF NVAVVSIIIQFITGQI >Mature_336_residues MERLKTILPGILLSFFIAMLATWLGNLLPVIGGAVFGIIIGIIINNIIGKPKNTIEGVAFTSKKVLQWAIIVLGAGLSLS QVRKTGLESLEVTIFTIATAFITAYVVGKLFKIPDKLKTLIGVGTAICGGSAIAAISPIIEADEVEIAYSISTIFLFNII AVLIFPPLGHLLGFSDKAFGLWAGTAINDTSSVVAAGYAFSNKAGEYATIVKLTRATLIIPISLIFAFITAYKKKKEAEM GTGEVNYSFKKIFPWFILWFLVASLLNTMGLFKGNTIHYINELGKFLIVMALSAIGLSSNFKDMTKAGFKPILLGVIVWF NVAVVSIIIQFITGQI
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=321, Percent_Identity=29.595015576324, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 36178; Mature: 36178
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLKTILPGILLSFFIAMLATWLGNLLPVIGGAVFGIIIGIIINNIIGKPKNTIEGVAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TSKKVLQWAIIVLGAGLSLSQVRKTGLESLEVTIFTIATAFITAYVVGKLFKIPDKLKTL HHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IGVGTAICGGSAIAAISPIIEADEVEIAYSISTIFLFNIIAVLIFPPLGHLLGFSDKAFG HHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE LWAGTAINDTSSVVAAGYAFSNKAGEYATIVKLTRATLIIPISLIFAFITAYKKKKEAEM EEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GTGEVNYSFKKIFPWFILWFLVASLLNTMGLFKGNTIHYINELGKFLIVMALSAIGLSSN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC FKDMTKAGFKPILLGVIVWFNVAVVSIIIQFITGQI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERLKTILPGILLSFFIAMLATWLGNLLPVIGGAVFGIIIGIIINNIIGKPKNTIEGVAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TSKKVLQWAIIVLGAGLSLSQVRKTGLESLEVTIFTIATAFITAYVVGKLFKIPDKLKTL HHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IGVGTAICGGSAIAAISPIIEADEVEIAYSISTIFLFNIIAVLIFPPLGHLLGFSDKAFG HHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE LWAGTAINDTSSVVAAGYAFSNKAGEYATIVKLTRATLIIPISLIFAFITAYKKKKEAEM EEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GTGEVNYSFKKIFPWFILWFLVASLLNTMGLFKGNTIHYINELGKFLIVMALSAIGLSSN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC FKDMTKAGFKPILLGVIVWFNVAVVSIIIQFITGQI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]