Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756740

Identifier: 170756740

GI number: 170756740

Start: 2921338

End: 2923371

Strand: Reverse

Name: 170756740

Synonym: CLD_1821

Alternate gene names: NA

Gene position: 2923371-2921338 (Counterclockwise)

Preceding gene: 170756387

Following gene: 170756538

Centisome position: 73.86

GC content: 27.38

Gene sequence:

>2034_bases
ATGAAAAAGACAATTTATAGTTGCTCTACATTAGATAAGTGTATAAATAAGGCTTGTAAAGAACTAGGATTAAAAAAAGA
GGAATTAAATTATGAAATTATAGAAGAGAAACAAGGCTTTTTCATGAAAAAGACTACAATATTAGTTAATGCAGAAGAAA
AATTAATGAATATGAAAGAAGATAAAGCTACTATAGAAAATAACCTAGAGGAAAATATAGAACATAATGAGGAAAAAATA
GAGATAGAAAAGGAATCAATAGCTAAAGAAACTATAGCAGTTAATGATGGAAAGGTAAGAATAGTAAAAGAACAAGTAAT
AGTTACAAATCCTAAAGAGGGTGGAAAACCAGCAGCTATAGCTCCAGGGGATAATGTAACTATATTAATAGATGGAGACA
GAATAAAATCCAGAAAAGAAGTCTTTGAAGAAAATAAAATAGAAGTTATTTTTGAAGAAGTTAAAGCTCATAGAGAGTTA
AATGTTAAAACGGATCAAAATAATATGGAAGCTTATATTTCAGTAATATATAAGCCGGAAATAAAGTATGGATTGAAAGA
TGTAGAAGATAAAAATTATTTAATATTAAACTCTTGTAAAATGGAAGAAAAAGATCCTCCTTATTATACTGAAGAAGAAA
TTATAGAAGCTTTAAAAAAGATGAGGATAGTTTATGGAATAGTAAAAGAAAATCTAGAGCAGTGTACAAAAAATAATTGT
ATAGAATTGCTAATAGCTAAAGGAAAAGAAACTATTAACGAAGAGGATGAAAGTATAGAGATTAAATTTACAACAGATAA
TCAAGAATTAAAATTAGCAGAGGATAAAACAGGAAATGTAGATTTTAAAAGTATAGGTTCAATAGAATCTGTAAAGCCAG
GAGAGGTATTAGCTGTAAGAAAAAAAGGTAAAGAGGGACAAGATGGAATCGATATAAAAGGTATAGTAAAAAAATATAAA
CAAGGAAAGAAAATTATATTGAAACCAGGTCAAGGAACAATTTTAAGGGATGAAGATACCATAGAAGCTTCTATAAAAGG
AAAACCCTGTGTAAAATCTAATATATTTTATGTATATCAAGTCCATGAAGTTAAAGGTGATGTGGATATAAGTACAGGAA
ATATAACATTTGTAGGGGATGTAGTAGTACAAGGCTCCGTAAAGGAAGGTATGAAAGTAGAAGCAGGAAATTCTGTAGAA
ATAAAAAAACATGTAGAGAGAGCAGAGATAATTTCAAAGAGTAATTTAAATATAGATGGAAATATAATAAATTCTGATAT
ATACGGTGGTGGAGAAGATACTTTAAAGGTAATGGTATTAAATAAATTAGAAAAATTAAAGGATATTCTTACAGAACTAA
TTTCCGCTGTGGAAGAAATAAAGAGATTTAATTTACTTGGAGAAGGTAAAAAAGACGGAGAGATAATAAAAATCTTAATA
GAGAATAAGTTTAAAACTTTGACCAAAATATGTATAGCTATAATGGCTAATATAAATATGTGTAGAAGTGATGATGAGGA
AGATGAATTAGTAGGAATTATAAGGAAAAAGTTAATAGGATTAGGTCCTGTTCATATAAAAAATTATAGGGAATTAGAAC
AAATAGTAAATCTTATAGAAGAAAAAATAAAGATGTGTAAGGAAGGATTATCATTACCCGTTAATGTTAATATTAGCTAT
TGTCAAGATTCTAAAATAAAAAGTACAGGAGATATTTATATAACGGGTAAAGGTGAATATATATCAAAATTAACAAGTAA
TAATAATGTTTACTTTACTAAAGATGATAGTGTAGCAAGAGGTGGGCACATAATAGCTAAAAATGAAATAAGATGTAAAG
AGGTAGGAAGCGAAGCAGGAGTTATTACTAAACTACAAATTTTACAAAAGGGAGATATATATGTAGATGTAGCCTATCAA
AATACAATATTTATTATAGGTGATAGAGAATACTTATTAGAAATACCAAGTAAAGATATACATGCTTATTTAGACAAAAA
AGGAGAGATTACCGTAGAAAAGTTTGTATTATAG

Upstream 100 bases:

>100_bases
ATTATTATATGATATAAAATATAGTTATATATACCTATATTTAGAATCTGTATATTCCTCAAAATAGGGGGCGGGATAAT
ATAATTTAAGGGGGATCAAT

Downstream 100 bases:

>100_bases
GAGGTTAATTTAGTAATGGATATAAGTGAAGCTAAAGTATTAATATTTAAAATAAATGGAGAATACTATGCCGCAGATAT
CATGGAAATAGAAAGAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MKKTIYSCSTLDKCINKACKELGLKKEELNYEIIEEKQGFFMKKTTILVNAEEKLMNMKEDKATIENNLEENIEHNEEKI
EIEKESIAKETIAVNDGKVRIVKEQVIVTNPKEGGKPAAIAPGDNVTILIDGDRIKSRKEVFEENKIEVIFEEVKAHREL
NVKTDQNNMEAYISVIYKPEIKYGLKDVEDKNYLILNSCKMEEKDPPYYTEEEIIEALKKMRIVYGIVKENLEQCTKNNC
IELLIAKGKETINEEDESIEIKFTTDNQELKLAEDKTGNVDFKSIGSIESVKPGEVLAVRKKGKEGQDGIDIKGIVKKYK
QGKKIILKPGQGTILRDEDTIEASIKGKPCVKSNIFYVYQVHEVKGDVDISTGNITFVGDVVVQGSVKEGMKVEAGNSVE
IKKHVERAEIISKSNLNIDGNIINSDIYGGGEDTLKVMVLNKLEKLKDILTELISAVEEIKRFNLLGEGKKDGEIIKILI
ENKFKTLTKICIAIMANINMCRSDDEEDELVGIIRKKLIGLGPVHIKNYRELEQIVNLIEEKIKMCKEGLSLPVNVNISY
CQDSKIKSTGDIYITGKGEYISKLTSNNNVYFTKDDSVARGGHIIAKNEIRCKEVGSEAGVITKLQILQKGDIYVDVAYQ
NTIFIIGDREYLLEIPSKDIHAYLDKKGEITVEKFVL

Sequences:

>Translated_677_residues
MKKTIYSCSTLDKCINKACKELGLKKEELNYEIIEEKQGFFMKKTTILVNAEEKLMNMKEDKATIENNLEENIEHNEEKI
EIEKESIAKETIAVNDGKVRIVKEQVIVTNPKEGGKPAAIAPGDNVTILIDGDRIKSRKEVFEENKIEVIFEEVKAHREL
NVKTDQNNMEAYISVIYKPEIKYGLKDVEDKNYLILNSCKMEEKDPPYYTEEEIIEALKKMRIVYGIVKENLEQCTKNNC
IELLIAKGKETINEEDESIEIKFTTDNQELKLAEDKTGNVDFKSIGSIESVKPGEVLAVRKKGKEGQDGIDIKGIVKKYK
QGKKIILKPGQGTILRDEDTIEASIKGKPCVKSNIFYVYQVHEVKGDVDISTGNITFVGDVVVQGSVKEGMKVEAGNSVE
IKKHVERAEIISKSNLNIDGNIINSDIYGGGEDTLKVMVLNKLEKLKDILTELISAVEEIKRFNLLGEGKKDGEIIKILI
ENKFKTLTKICIAIMANINMCRSDDEEDELVGIIRKKLIGLGPVHIKNYRELEQIVNLIEEKIKMCKEGLSLPVNVNISY
CQDSKIKSTGDIYITGKGEYISKLTSNNNVYFTKDDSVARGGHIIAKNEIRCKEVGSEAGVITKLQILQKGDIYVDVAYQ
NTIFIIGDREYLLEIPSKDIHAYLDKKGEITVEKFVL
>Mature_677_residues
MKKTIYSCSTLDKCINKACKELGLKKEELNYEIIEEKQGFFMKKTTILVNAEEKLMNMKEDKATIENNLEENIEHNEEKI
EIEKESIAKETIAVNDGKVRIVKEQVIVTNPKEGGKPAAIAPGDNVTILIDGDRIKSRKEVFEENKIEVIFEEVKAHREL
NVKTDQNNMEAYISVIYKPEIKYGLKDVEDKNYLILNSCKMEEKDPPYYTEEEIIEALKKMRIVYGIVKENLEQCTKNNC
IELLIAKGKETINEEDESIEIKFTTDNQELKLAEDKTGNVDFKSIGSIESVKPGEVLAVRKKGKEGQDGIDIKGIVKKYK
QGKKIILKPGQGTILRDEDTIEASIKGKPCVKSNIFYVYQVHEVKGDVDISTGNITFVGDVVVQGSVKEGMKVEAGNSVE
IKKHVERAEIISKSNLNIDGNIINSDIYGGGEDTLKVMVLNKLEKLKDILTELISAVEEIKRFNLLGEGKKDGEIIKILI
ENKFKTLTKICIAIMANINMCRSDDEEDELVGIIRKKLIGLGPVHIKNYRELEQIVNLIEEKIKMCKEGLSLPVNVNISY
CQDSKIKSTGDIYITGKGEYISKLTSNNNVYFTKDDSVARGGHIIAKNEIRCKEVGSEAGVITKLQILQKGDIYVDVAYQ
NTIFIIGDREYLLEIPSKDIHAYLDKKGEITVEKFVL

Specific function: Unknown

COG id: COG1315

COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76351; Mature: 76351

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTIYSCSTLDKCINKACKELGLKKEELNYEIIEEKQGFFMKKTTILVNAEEKLMNMKE
CCCCEECHHHHHHHHHHHHHHHCCCHHHCCHHEECCCCCCEEEEEEEEEECHHHHHCCHH
DKATIENNLEENIEHNEEKIEIEKESIAKETIAVNDGKVRIVKEQVIVTNPKEGGKPAAI
HHHHHHHCHHHHHCCCCHHEEEEHHHHHHHHEEECCCEEEEEEEEEEEECCCCCCCCCEE
APGDNVTILIDGDRIKSRKEVFEENKIEVIFEEVKAHRELNVKTDQNNMEAYISVIYKPE
CCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCC
IKYGLKDVEDKNYLILNSCKMEEKDPPYYTEEEIIEALKKMRIVYGIVKENLEQCTKNNC
HHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IELLIAKGKETINEEDESIEIKFTTDNQELKLAEDKTGNVDFKSIGSIESVKPGEVLAVR
EEEEEECCCHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEE
KKGKEGQDGIDIKGIVKKYKQGKKIILKPGQGTILRDEDTIEASIKGKPCVKSNIFYVYQ
CCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEECCCCCEEEECCCCCCEECCEEEEEE
VHEVKGDVDISTGNITFVGDVVVQGSVKEGMKVEAGNSVEIKKHVERAEIISKSNLNIDG
EEECCCCEEEECCCEEEEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCC
NIINSDIYGGGEDTLKVMVLNKLEKLKDILTELISAVEEIKRFNLLGEGKKDGEIIKILI
EEEECCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
ENKFKTLTKICIAIMANINMCRSDDEEDELVGIIRKKLIGLGPVHIKNYRELEQIVNLIE
HHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHH
EKIKMCKEGLSLPVNVNISYCQDSKIKSTGDIYITGKGEYISKLTSNNNVYFTKDDSVAR
HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEEECCHHHHHHCCCCCEEEECCCCCCC
GGHIIAKNEIRCKEVGSEAGVITKLQILQKGDIYVDVAYQNTIFIIGDREYLLEIPSKDI
CCEEEEECCCCHHHCCCCCCCEEEEEEEECCCEEEEEEECCEEEEEECCCEEEECCCCHH
HAYLDKKGEITVEKFVL
HHHHCCCCCEEEEEECC
>Mature Secondary Structure
MKKTIYSCSTLDKCINKACKELGLKKEELNYEIIEEKQGFFMKKTTILVNAEEKLMNMKE
CCCCEECHHHHHHHHHHHHHHHCCCHHHCCHHEECCCCCCEEEEEEEEEECHHHHHCCHH
DKATIENNLEENIEHNEEKIEIEKESIAKETIAVNDGKVRIVKEQVIVTNPKEGGKPAAI
HHHHHHHCHHHHHCCCCHHEEEEHHHHHHHHEEECCCEEEEEEEEEEEECCCCCCCCCEE
APGDNVTILIDGDRIKSRKEVFEENKIEVIFEEVKAHRELNVKTDQNNMEAYISVIYKPE
CCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCC
IKYGLKDVEDKNYLILNSCKMEEKDPPYYTEEEIIEALKKMRIVYGIVKENLEQCTKNNC
HHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IELLIAKGKETINEEDESIEIKFTTDNQELKLAEDKTGNVDFKSIGSIESVKPGEVLAVR
EEEEEECCCHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEE
KKGKEGQDGIDIKGIVKKYKQGKKIILKPGQGTILRDEDTIEASIKGKPCVKSNIFYVYQ
CCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEECCCCCEEEECCCCCCEECCEEEEEE
VHEVKGDVDISTGNITFVGDVVVQGSVKEGMKVEAGNSVEIKKHVERAEIISKSNLNIDG
EEECCCCEEEECCCEEEEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCC
NIINSDIYGGGEDTLKVMVLNKLEKLKDILTELISAVEEIKRFNLLGEGKKDGEIIKILI
EEEECCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
ENKFKTLTKICIAIMANINMCRSDDEEDELVGIIRKKLIGLGPVHIKNYRELEQIVNLIE
HHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHH
EKIKMCKEGLSLPVNVNISYCQDSKIKSTGDIYITGKGEYISKLTSNNNVYFTKDDSVAR
HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEEECCHHHHHHCCCCCEEEECCCCCCC
GGHIIAKNEIRCKEVGSEAGVITKLQILQKGDIYVDVAYQNTIFIIGDREYLLEIPSKDI
CCEEEEECCCCHHHCCCCCCCEEEEEEEECCCEEEEEEECCEEEEEECCCEEEECCCCHH
HAYLDKKGEITVEKFVL
HHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA