| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756672
Identifier: 170756672
GI number: 170756672
Start: 1420591
End: 1420827
Strand: Direct
Name: 170756672
Synonym: CLD_3277
Alternate gene names: NA
Gene position: 1420591-1420827 (Clockwise)
Preceding gene: 170755915
Following gene: 170755356
Centisome position: 35.89
GC content: 26.58
Gene sequence:
>237_bases TTGAAGAAAAAAAATGTTATTAAAGTAGATAAACAAAAGAAGAAAGTGATGATAGATTCCATAAAAGAATATTTTTATAA TGAAAGAGAGGAAGAGTTAGGAGATTTAGCTGCGGGCATGATTTTAGATTTTTTCCTAGAAGAATTAGCCACAGAGATTT ACAATAAAGGAGTTTATGATGCATATGAATATTCTTTAGAAAGAATTGAAGATGTGCTTTCTATACAAAAATATTAA
Upstream 100 bases:
>100_bases ATACAACATACTAATATTTTATCTTACATATTTTAAATCAACAAAAAATAATATGATTAAATAATTCTTAGTTATATTAT ACATTAAATGGAGGGGTTTT
Downstream 100 bases:
>100_bases TAAAAGATAAAAGTAATTAAAATATTATTTTTATAAAAATATTTCTATACATAAATAAAAACTAAAAGAGGATGTCTCAG AATAGCCTTAATTTTAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MKKKNVIKVDKQKKKVMIDSIKEYFYNEREEELGDLAAGMILDFFLEELATEIYNKGVYDAYEYSLERIEDVLSIQKY
Sequences:
>Translated_78_residues MKKKNVIKVDKQKKKVMIDSIKEYFYNEREEELGDLAAGMILDFFLEELATEIYNKGVYDAYEYSLERIEDVLSIQKY >Mature_78_residues MKKKNVIKVDKQKKKVMIDSIKEYFYNEREEELGDLAAGMILDFFLEELATEIYNKGVYDAYEYSLERIEDVLSIQKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9325; Mature: 9325
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKNVIKVDKQKKKVMIDSIKEYFYNEREEELGDLAAGMILDFFLEELATEIYNKGVYD CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AYEYSLERIEDVLSIQKY HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKKNVIKVDKQKKKVMIDSIKEYFYNEREEELGDLAAGMILDFFLEELATEIYNKGVYD CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AYEYSLERIEDVLSIQKY HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA