| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756646
Identifier: 170756646
GI number: 170756646
Start: 1094353
End: 1094892
Strand: Direct
Name: 170756646
Synonym: CLD_3577
Alternate gene names: NA
Gene position: 1094353-1094892 (Clockwise)
Preceding gene: 170755889
Following gene: 170757486
Centisome position: 27.65
GC content: 20.56
Gene sequence:
>540_bases ATGAAGAAAAACCTAAGAGTAATATTATCAGTGTTAATATTAGTTTTAATTGACCAAAGTATAAAAATTTATATATATAA TAATTTGATGAATAAAGAGTTTTATATATTTGGTAGCATAATTGGATTTAGCCCAATTATTAATACAAAATATTCATATT TTAATTCTTTTGGGAATATGGAAATAGGGTTAATAACTCACATAGTTTTAAATATAGTGATGCTATTTTTGATTTTAATA ATCTTTGACTTTATTAAAGAAAGGTATAGCAATAATAAAATAATTTATTGTTTATTTGTTTTGGCATGTGCGGCAGCAAT TTGTTCCTTAATTGATAAAGTTTTTTGGGGAGGAAGTTTAGATTTTATTTCCTTCAAAAATTTTTTTATATTTGATTTAA AGGATGTTTATATTAGTATTTTTCAGATTGTAGCAATGTTGTGTATAATATTAAATTACAAAAAATTAAAGGCTATTAAT GAAAAGACTATTTATAATGAGTTTAAATCATATATAAGATTAAGATGTTTTAAAAATTAA
Upstream 100 bases:
>100_bases GATTTTATAAGGGGTTTTATAGACGGAATGACAGCTGTACAATAAGTAGTGATTATAGTATTAGTTTTTATTAATTACTA AAAAGTAGGGGAATAGGAAT
Downstream 100 bases:
>100_bases GGTTAATTGTAAATACATGAAAGAAGGTAAAGAAAATGAAAAAAAGAACCAAGCTAATTATCTCTTGTTTAGTATTTATA ATAATTGCAGGATCAAGATC
Product: putative signal peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKKNLRVILSVLILVLIDQSIKIYIYNNLMNKEFYIFGSIIGFSPIINTKYSYFNSFGNMEIGLITHIVLNIVMLFLILI IFDFIKERYSNNKIIYCLFVLACAAAICSLIDKVFWGGSLDFISFKNFFIFDLKDVYISIFQIVAMLCIILNYKKLKAIN EKTIYNEFKSYIRLRCFKN
Sequences:
>Translated_179_residues MKKNLRVILSVLILVLIDQSIKIYIYNNLMNKEFYIFGSIIGFSPIINTKYSYFNSFGNMEIGLITHIVLNIVMLFLILI IFDFIKERYSNNKIIYCLFVLACAAAICSLIDKVFWGGSLDFISFKNFFIFDLKDVYISIFQIVAMLCIILNYKKLKAIN EKTIYNEFKSYIRLRCFKN >Mature_179_residues MKKNLRVILSVLILVLIDQSIKIYIYNNLMNKEFYIFGSIIGFSPIINTKYSYFNSFGNMEIGLITHIVLNIVMLFLILI IFDFIKERYSNNKIIYCLFVLACAAAICSLIDKVFWGGSLDFISFKNFFIFDLKDVYISIFQIVAMLCIILNYKKLKAIN EKTIYNEFKSYIRLRCFKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.23.36
Molecular weight: Translated: 21041; Mature: 21041
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNLRVILSVLILVLIDQSIKIYIYNNLMNKEFYIFGSIIGFSPIINTKYSYFNSFGNM CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHEEEEHHHHCCHHHCCHHHHHHCCCCC EIGLITHIVLNIVMLFLILIIFDFIKERYSNNKIIYCLFVLACAAAICSLIDKVFWGGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DFISFKNFFIFDLKDVYISIFQIVAMLCIILNYKKLKAINEKTIYNEFKSYIRLRCFKN CCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKNLRVILSVLILVLIDQSIKIYIYNNLMNKEFYIFGSIIGFSPIINTKYSYFNSFGNM CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHEEEEHHHHCCHHHCCHHHHHHCCCCC EIGLITHIVLNIVMLFLILIIFDFIKERYSNNKIIYCLFVLACAAAICSLIDKVFWGGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DFISFKNFFIFDLKDVYISIFQIVAMLCIILNYKKLKAINEKTIYNEFKSYIRLRCFKN CCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA