Click here to switch to the map view.

The map label for this gene is 170756644

Identifier: 170756644

GI number: 170756644

Start: 1381287

End: 1381490

Strand: Direct

Name: 170756644

Synonym: CLD_3318

Alternate gene names: NA

Gene position: 1381287-1381490 (Clockwise)

Preceding gene: 170757541

Following gene: 170754303

Centisome position: 34.9

GC content: 26.47

Gene sequence:

>204_bases
ATGGCTATAAAAAATAAATTGTTAGATATTGGATTAAGTATGGGTTACAAAACGCAAAAGGAATTTGCTGAGTTTCTAGG
TATAAGACGTGTCCAATATAATAAGTATGAAAACAATAAAGAACAACCAGCCCTAGAAGCTCTATATAAAATTAGTTTGA
AGTTAAATATAAAAATGGAGAATATTATTTACTTAGATGAATAA

Upstream 100 bases:

>100_bases
AGATATAATAATTTTATTCTTTTTTTAATATACATTTTTAAACATATAAAGGAAATAATATTATACCTTAGAATATTATT
TAATGGGAGGTATTAGATAT

Downstream 100 bases:

>100_bases
TATTCTTTTATTTTTTATAGTAATAGTTCAAAATAATATATTTTAGTTCAAAATAGGAAGTTTTTATACCAAAGAAGTAT
ATAGTATTAGTAAAGAAGGG

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MAIKNKLLDIGLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLKLNIKMENIIYLDE

Sequences:

>Translated_67_residues
MAIKNKLLDIGLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLKLNIKMENIIYLDE
>Mature_66_residues
AIKNKLLDIGLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLKLNIKMENIIYLDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7928; Mature: 7797

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKNKLLDIGLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLKLNIKME
CCCCHHHHHHHCCCCCCCHHHHHHHHCCHHEECCCCCCCCCCHHHHHHHHEEEEEEEEEE
NIIYLDE
EEEEECC
>Mature Secondary Structure 
AIKNKLLDIGLSMGYKTQKEFAEFLGIRRVQYNKYENNKEQPALEALYKISLKLNIKME
CCCHHHHHHHCCCCCCCHHHHHHHHCCHHEECCCCCCCCCCHHHHHHHHEEEEEEEEEE
NIIYLDE
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA