| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is cotI [H]
Identifier: 170756643
GI number: 170756643
Start: 145515
End: 146525
Strand: Direct
Name: cotI [H]
Synonym: CLD_0677
Alternate gene names: 170756643
Gene position: 145515-146525 (Clockwise)
Preceding gene: 170755057
Following gene: 170755858
Centisome position: 3.68
GC content: 24.43
Gene sequence:
>1011_bases TTGGATAAATCAGAAATTATAAGCATAGTAGAAAATAATTATGATATAAATATTAATTCTATAGAAAAAATAAAGAATGT ATATAAGATAATTAGTGATTCTAATAAAACATATGCTTTTAAAATAATAAAATATGAATTTAATCATTTTTTATTTATAA TAAGTTGCATGAAACATTTGCAATATAATAATTTTAGTAAAATTCCACAAATTATTCCTAATAATAAAGGTTTAGATTAT ATAAAAATAGGAGATTTTTATGGATATATAACAGAATGGATAGAAGGCTCAAGACAATGCAATTATTCTAATCCAGTAGA AGTTATGATGGCTGCCAATAAACTAGGGCAGCTACATGAAAAGAGTAAGGACTTTTATATAACAGAAAATATGAAGCCTA GAATTGGATGGTTTAAATGGCCCAAGACATTTCAAACAAGAAAAGATGAAATATTAGATTTTGAAAAGAGAATATTAAAT AAAAATAAAAAAAGTGAATTTGATAATTCTTATATAAATATATTAGAGGATGAAATTGAAAGAGCAGATAGGTCAATAAA GAATTTATGTGAAACAAACTATCTAAATGTAATGTTAAGGCAGATTGAGGATAGATGTTTTTGTCATCATGATTATGCTA ATCATAACATACTTATAGACAGTGAAAATCAAATATATATAATAGATTTTGATTATTGTATGCTAGATACTAAATTACAT GATTTAGCCAGTATACTTATTAGAGTTATGAAAAATGGCAAATGGGATTTAAAATCAGCAGAACTTATTTTGAATTCTTA TAGGAAAGAATCGGATGTAGATAAAGAAAGTATACCTATAATAGCAGCTTTTATGGAATTTCCGCAGGATTATTGGCAAA TAGGTATACAGTATTATTGGGAAAAACAACCTTGGAGTGAAGAATTCTTTTTTAATAAGCTAAATAGATATTATGAAGAT AGAGAAGAAAGGCAAGAGTTTATAGAAAAATTTAGAAGAATCAATATTTAA
Upstream 100 bases:
>100_bases TATATAATATTAATCTTTCCTAAAAAATGTTCCAGTTATCACCAAAGTATAATATTTTCATATAATACATATAGATTAAT AAAATAATGGAGGCATTATT
Downstream 100 bases:
>100_bases GGAGAGATATAGTTATGTCTCGTAAGAAAAAATATTATGAAGATATAAAAGAAAATATGGATGAATTAAACAGATACGAA GAAGAATTACAGGAATTAAA
Product: putative spore coat protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MDKSEIISIVENNYDININSIEKIKNVYKIISDSNKTYAFKIIKYEFNHFLFIISCMKHLQYNNFSKIPQIIPNNKGLDY IKIGDFYGYITEWIEGSRQCNYSNPVEVMMAANKLGQLHEKSKDFYITENMKPRIGWFKWPKTFQTRKDEILDFEKRILN KNKKSEFDNSYINILEDEIERADRSIKNLCETNYLNVMLRQIEDRCFCHHDYANHNILIDSENQIYIIDFDYCMLDTKLH DLASILIRVMKNGKWDLKSAELILNSYRKESDVDKESIPIIAAFMEFPQDYWQIGIQYYWEKQPWSEEFFFNKLNRYYED REERQEFIEKFRRINI
Sequences:
>Translated_336_residues MDKSEIISIVENNYDININSIEKIKNVYKIISDSNKTYAFKIIKYEFNHFLFIISCMKHLQYNNFSKIPQIIPNNKGLDY IKIGDFYGYITEWIEGSRQCNYSNPVEVMMAANKLGQLHEKSKDFYITENMKPRIGWFKWPKTFQTRKDEILDFEKRILN KNKKSEFDNSYINILEDEIERADRSIKNLCETNYLNVMLRQIEDRCFCHHDYANHNILIDSENQIYIIDFDYCMLDTKLH DLASILIRVMKNGKWDLKSAELILNSYRKESDVDKESIPIIAAFMEFPQDYWQIGIQYYWEKQPWSEEFFFNKLNRYYED REERQEFIEKFRRINI >Mature_336_residues MDKSEIISIVENNYDININSIEKIKNVYKIISDSNKTYAFKIIKYEFNHFLFIISCMKHLQYNNFSKIPQIIPNNKGLDY IKIGDFYGYITEWIEGSRQCNYSNPVEVMMAANKLGQLHEKSKDFYITENMKPRIGWFKWPKTFQTRKDEILDFEKRILN KNKKSEFDNSYINILEDEIERADRSIKNLCETNYLNVMLRQIEDRCFCHHDYANHNILIDSENQIYIIDFDYCMLDTKLH DLASILIRVMKNGKWDLKSAELILNSYRKESDVDKESIPIIAAFMEFPQDYWQIGIQYYWEKQPWSEEFFFNKLNRYYED REERQEFIEKFRRINI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 40749; Mature: 40749
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSEIISIVENNYDININSIEKIKNVYKIISDSNKTYAFKIIKYEFNHFLFIISCMKHL CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHH QYNNFSKIPQIIPNNKGLDYIKIGDFYGYITEWIEGSRQCNYSNPVEVMMAANKLGQLHE CCCCHHHCHHHCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH KSKDFYITENMKPRIGWFKWPKTFQTRKDEILDFEKRILNKNKKSEFDNSYINILEDEIE CCCCEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RADRSIKNLCETNYLNVMLRQIEDRCFCHHDYANHNILIDSENQIYIIDFDYCMLDTKLH HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCEEEEEEEHHHHHHHHHH DLASILIRVMKNGKWDLKSAELILNSYRKESDVDKESIPIIAAFMEFPQDYWQIGIQYYW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHHHCCHHHHHHHHHEEE EKQPWSEEFFFNKLNRYYEDREERQEFIEKFRRINI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDKSEIISIVENNYDININSIEKIKNVYKIISDSNKTYAFKIIKYEFNHFLFIISCMKHL CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHH QYNNFSKIPQIIPNNKGLDYIKIGDFYGYITEWIEGSRQCNYSNPVEVMMAANKLGQLHE CCCCHHHCHHHCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH KSKDFYITENMKPRIGWFKWPKTFQTRKDEILDFEKRILNKNKKSEFDNSYINILEDEIE CCCCEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RADRSIKNLCETNYLNVMLRQIEDRCFCHHDYANHNILIDSENQIYIIDFDYCMLDTKLH HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCEEEEEEEHHHHHHHHHH DLASILIRVMKNGKWDLKSAELILNSYRKESDVDKESIPIIAAFMEFPQDYWQIGIQYYW HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHHHCCHHHHHHHHHEEE EKQPWSEEFFFNKLNRYYEDREERQEFIEKFRRINI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]