| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756634
Identifier: 170756634
GI number: 170756634
Start: 518044
End: 519159
Strand: Direct
Name: 170756634
Synonym: CLD_0337
Alternate gene names: NA
Gene position: 518044-519159 (Clockwise)
Preceding gene: 170757517
Following gene: 170755629
Centisome position: 13.09
GC content: 26.7
Gene sequence:
>1116_bases ATGTATAGAAAAAAACTAAACTTAAAAACTGTATGTGCTTTTATTCTTATATTATTTATTAATATATTACTTATTTCCTG CAAGAGTGGAAATAGCAATAAGGGTATCATAGTGGAAAAATGGGATAATTTTTATGAAGGGAATAACATACATTTTTATT ATAGTGATGGCAAAAGTCCAAACTCTCAACAATTAAAATCCAAGTATTCTTTAGATAAGCTCACATCAAAAGGAAAAGAT GATTTAGATAAGGCTTTAGAGATAACTAGTTGGTTAAATAATAAATTAAAGTTTTCTAAAAACAGTATAAAGACAGAAGA GGACACTTTAACTATATTAGAAAAATATAAAGAGGGAGAGACTGTTTCAGATAAAGAATTTAATGAGATTTTTACAGAGG CTATTTCTTCTGTTGGAATATATTCAAGAATAGGAGAATTTAGAGTTAAGGACGCTCAGCATAGCAAGAAGAATGATTTT TTCATGGTTTCAGAAATTTGGAGCGATAAATATAAAAAATGGATAATGATAGATGTGGTTAATTCCTGTTATATGTCCAA AGCTGGAGTACCATTAAGTGCTATAGAAATTTTAAATAATGGAATAAGTGGACTAGAAATAAATGGAGTTAAAGATAAAA ATAAATATATTAAAAAAATGGAGAGATATTTTTATAGTTACACTATAGGTATCGACAATAATATTCATGATGGAGTTAAA AGTAATTCATATATTACTTATATACAAAGTGGACAATTACCAGAATTGAAAACTATTAAAGGATATATTAAACCAACTAT TTTTGTGAATAATGACTCTTTATTTACTATTTCACCTAAAATTGAGTATAAAGACTTACAAAATGATAAAAAGCCTACTC TAATAATATCTAAAAAGAACATTGAAGGAAAAGAAGAAGAAACTCCAAGCTTTTATGTAGCTTCTTTTAAAGATAGTGTT ATGGTTACGGAGTTCTATATAAGTGTTAATGGAGCAGATTTTGGCAAAGTAAGTACTATTTTTGAATTGAAATTAAAAGA AGGGCGAAACTCTATAAAGTTATCAGAAAATGGTAAGGATGTCGTAAGGGAAGTAATAGTGAATTATAAAAAGTAA
Upstream 100 bases:
>100_bases TTGTGAATATTATATAAATAATAAAAATTTTAAATCAATACTAGATACTTAATATACGATAAACATATTAATATATAAAT TGAGAAAAAGGGGAATTTAA
Downstream 100 bases:
>100_bases TAAAGATTATTATTTTCTTATATGTTCATTAATATATTTGTATAAGTCATAAAAAATAGTATAATATAGAAGGTATTAAA TAAAAAAGAGAGTGAGGAGT
Product: putative lipoprotein
Products: NA
Alternate protein names: Transglutaminase Domain Protein
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKD DLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDF FMVSEIWSDKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKNIEGKEEETPSFYVASFKDSV MVTEFYISVNGADFGKVSTIFELKLKEGRNSIKLSENGKDVVREVIVNYKK
Sequences:
>Translated_371_residues MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKD DLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDF FMVSEIWSDKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKNIEGKEEETPSFYVASFKDSV MVTEFYISVNGADFGKVSTIFELKLKEGRNSIKLSENGKDVVREVIVNYKK >Mature_371_residues MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKD DLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDF FMVSEIWSDKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKNIEGKEEETPSFYVASFKDSV MVTEFYISVNGADFGKVSTIFELKLKEGRNSIKLSENGKDVVREVIVNYKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42576; Mature: 42576
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSP CCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCC NSQQLKSKYSLDKLTSKGKDDLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGE CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCC TVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDFFMVSEIWSDKYKKWIMIDVV CCCCHHHHHHHHHHHHHCHHHHHHCCCEECCCCCCCCCCEEEEHHHHHHHHHEEEEEEEH NSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK HHHHHHCCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCC SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKN CCCEEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECCCEEHHHCCCCCCCEEEEEECC IEGKEEETPSFYVASFKDSVMVTEFYISVNGADFGKVSTIFELKLKEGRNSIKLSENGKD CCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCHH VVREVIVNYKK HHHHHHHCCCC >Mature Secondary Structure MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSP CCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCC NSQQLKSKYSLDKLTSKGKDDLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGE CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCC TVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDFFMVSEIWSDKYKKWIMIDVV CCCCHHHHHHHHHHHHHCHHHHHHCCCEECCCCCCCCCCEEEEHHHHHHHHHEEEEEEEH NSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK HHHHHHCCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCC SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKIEYKDLQNDKKPTLIISKKN CCCEEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECCCEEHHHCCCCCCCEEEEEECC IEGKEEETPSFYVASFKDSVMVTEFYISVNGADFGKVSTIFELKLKEGRNSIKLSENGKD CCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCCCHH VVREVIVNYKK HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA