| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756626
Identifier: 170756626
GI number: 170756626
Start: 3085270
End: 3086094
Strand: Reverse
Name: 170756626
Synonym: CLD_1688
Alternate gene names: NA
Gene position: 3086094-3085270 (Counterclockwise)
Preceding gene: 170757468
Following gene: 170754610
Centisome position: 77.97
GC content: 32.12
Gene sequence:
>825_bases ATGAAAAAAAGAATTTTTAAAGTTTTTACAGCATTATTTATGATTGCGATTATTTTAGGGGGAGTAATTTTAATTCAAAA TGACTTCAAAATTCTAGAAAAAGCTGTTGATATTAAAACTTCAAAGGGTATTTTGAAAGGAACTTTAGTATTACCACAAA AGCTATCAGATAAAGCAGGTTTAGTAGTATTCATACATGGAGATGGTCTGGCTGATGCATCATATAATGAGCAGTACAAA CCGCTGTGGGAAGAATTAGCTAAACAAGGCTATGCATCCTTATCATGGAGCAAACCAGGTATTGGTGGTTCAGAGTGGAG TTGGTTAGTGCAGTCAATGGATGATAGAGCAAGTGAAGCAAATGAAGTTATTGAGTGGGCAAAAACTTTACCTGAAATTG ATAATAACAGAATTGGATTATGGGGAGCAAGTCAAGCAGGCTGGGTTATTCCTAAAATTGTTCAGCTTAATAAGAATATT GCTTTTAATATACTAGTAGCACCTGCAATAAATTGGATTGAGCAAGGTAAATACAATACTTTAAAAGAGCTTGAGAAAAA GGGTACAACAAAAGATGAGATGATTAAAAAAGAAAAAGCATTTGAAAATGAATTGGAACTTATTAAAAATGATGTCAGCT ATGAAGAGTATGTAAAAGAAGTTGGACAGAAAGAAGCAGTATCGGAAGACCGATGGACTTTTATTAAGAAGAATTGTAAA GCAGATGCAACAGAAGATATTAAACATTTTTATAGTCCTGTAAAGTTATTTTTAGGTGGTAAGGATATAAATGTAGATAG TGAAAATACAAGAGAAGTTTATTAA
Upstream 100 bases:
>100_bases AACTTAATTAAAAATGCAAAAGAAAATTATTAACAGGAAGAAGAAAAATCAATAGAAGTTTTAAGTTTAAAATGTTTTAA TAAAAGGTGGAAAGATAACT
Downstream 100 bases:
>100_bases AAGGAAGTACCATCAGAACTTTTAAAGGTTACCTTGATACCAACAACTGATCATTTCATGCTTAAGGCTTCTTTAGTAGA TTCCAAGCTAAAAACTTCCC
Product: hydrolase family protein
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Hydrolase Protein; Hydrolase Of Alpha/Beta Superfamily; Type III Restriction Res Subunit Family; Serine Peptidase Family S; Hydrolase
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKKRIFKVFTALFMIAIILGGVILIQNDFKILEKAVDIKTSKGILKGTLVLPQKLSDKAGLVVFIHGDGLADASYNEQYK PLWEELAKQGYASLSWSKPGIGGSEWSWLVQSMDDRASEANEVIEWAKTLPEIDNNRIGLWGASQAGWVIPKIVQLNKNI AFNILVAPAINWIEQGKYNTLKELEKKGTTKDEMIKKEKAFENELELIKNDVSYEEYVKEVGQKEAVSEDRWTFIKKNCK ADATEDIKHFYSPVKLFLGGKDINVDSENTREVY
Sequences:
>Translated_274_residues MKKRIFKVFTALFMIAIILGGVILIQNDFKILEKAVDIKTSKGILKGTLVLPQKLSDKAGLVVFIHGDGLADASYNEQYK PLWEELAKQGYASLSWSKPGIGGSEWSWLVQSMDDRASEANEVIEWAKTLPEIDNNRIGLWGASQAGWVIPKIVQLNKNI AFNILVAPAINWIEQGKYNTLKELEKKGTTKDEMIKKEKAFENELELIKNDVSYEEYVKEVGQKEAVSEDRWTFIKKNCK ADATEDIKHFYSPVKLFLGGKDINVDSENTREVY >Mature_274_residues MKKRIFKVFTALFMIAIILGGVILIQNDFKILEKAVDIKTSKGILKGTLVLPQKLSDKAGLVVFIHGDGLADASYNEQYK PLWEELAKQGYASLSWSKPGIGGSEWSWLVQSMDDRASEANEVIEWAKTLPEIDNNRIGLWGASQAGWVIPKIVQLNKNI AFNILVAPAINWIEQGKYNTLKELEKKGTTKDEMIKKEKAFENELELIKNDVSYEEYVKEVGQKEAVSEDRWTFIKKNCK ADATEDIKHFYSPVKLFLGGKDINVDSENTREVY
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31035; Mature: 31035
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIFKVFTALFMIAIILGGVILIQNDFKILEKAVDIKTSKGILKGTLVLPQKLSDKAG CCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCHHHEEEECCHHCCCCCC LVVFIHGDGLADASYNEQYKPLWEELAKQGYASLSWSKPGIGGSEWSWLVQSMDDRASEA EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NEVIEWAKTLPEIDNNRIGLWGASQAGWVIPKIVQLNKNIAFNILVAPAINWIEQGKYNT HHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCHH LKELEKKGTTKDEMIKKEKAFENELELIKNDVSYEEYVKEVGQKEAVSEDRWTFIKKNCK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCC ADATEDIKHFYSPVKLFLGGKDINVDSENTREVY CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKRIFKVFTALFMIAIILGGVILIQNDFKILEKAVDIKTSKGILKGTLVLPQKLSDKAG CCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCHHHEEEECCHHCCCCCC LVVFIHGDGLADASYNEQYKPLWEELAKQGYASLSWSKPGIGGSEWSWLVQSMDDRASEA EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NEVIEWAKTLPEIDNNRIGLWGASQAGWVIPKIVQLNKNIAFNILVAPAINWIEQGKYNT HHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCHH LKELEKKGTTKDEMIKKEKAFENELELIKNDVSYEEYVKEVGQKEAVSEDRWTFIKKNCK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCC ADATEDIKHFYSPVKLFLGGKDINVDSENTREVY CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA