Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is ltaS2 [H]

Identifier: 170756584

GI number: 170756584

Start: 713359

End: 715269

Strand: Direct

Name: ltaS2 [H]

Synonym: CLD_0162

Alternate gene names: 170756584

Gene position: 713359-715269 (Clockwise)

Preceding gene: 170755532

Following gene: 170755098

Centisome position: 18.02

GC content: 28.73

Gene sequence:

>1911_bases
ATGGAGAAGGCTTTAAAGTTGAAAAATATAGTTACGAAAATAATTATTAGAAATTTAGATATAATATTATTTTTAATATT
AGTGAGTTTAAAAGTAATGTTTTATGGAAAAGAAATATCTCCAGAGTTTTTTAGCTATAAGTATATATTATTACCAGTTG
TAGCATCTGTGGGAGTACTATTAGGTATAGGGTATTTCCTCCAAAAACACAAAAGAACTAAATTTTTATATGTGTTAAAC
ATAATAATTAGTTCTATAATTATAGCAGATTTACTATACTACAGATATTATAAAGACATTATATCTATAGGGGCTATAAG
AAATGCCTTTTTATTAGGGGGAGTTGCCTCTAGTATTACAAGCTTGTTTAAACTGAAGGATTTTATATATTTTCTAGATA
TATTATTGATTATACCTTTCCTAAAGGTGTATAGAAATATGCCTTATAAGGAAAATAAAAAAATTATAAGAATAGGCGTG
GGATCTTTAATATTAGCAGGGGCTATTTTATTAAATGGTATAAATATATATAAATTATCAGTAGATCAACCAGGATTGCT
TAATACTATGAGTAATAGGATATATATAACTAAGGTTTTAGGGAATGTAAACTTTCATGTTATAGATGCTTATCAGTTCA
CAAGAAATAAGATAAATAATAGTAAAAAACTTCCGGAAGATAAAGAAAAAGAGTTAGTAGATAACTTTGAGGGAAAATCA
CAAATACAGGGAGAAAAATTAAAGGGTGTAGGAGAAGGAAAAAATTTAATAGTTATACAAGTAGAAGCACTTCAACAATT
TGCTATAAATGCAAAGGTGGAAGGCCAGGAAGTAACACCTAATTTAAATAAGTGGATAAATAAAAGTATGTATTTCGATA
ATTATTTTTATCAAGTAGCAGCAGGGAATACATCTGATGCAGAGTTTTTGTCTAATAATTCATTATATCCTGCAGTTTCA
GGAGCAGCTTATTATATGTATAGTGGTAATCAATTTAAATCGCTACCAAGTACACTTCAAGATAAGGGATACTACACAGC
GGCTATGCACGGCTATAAAGATGGATTTTGGAATAGAAATGTAATGTACAAAGCTCAAAAATTCCAAGATTTTCATGGGG
AAAGTACTTATAACATAGATGAACAGGTAGGGTTAGGTCTTAGTGATAAGTCTTTCTTTAATCAATCTTTGGAAAAAATT
AAGACTTTTAAACAACCTTTTTATAGTTTTTTAATAACTTTAAGTAGCCATTTCCCTTACGATGATGTAAAAGGATATGG
GGAATTTAATGTAGGAAAATATGAAGGTTCATTTTTAGGTAATTATTTAAAGGGTATACACTATACAGATGCCCAATTAG
GAATGTTTTTAGAAAACCTTGAAAAAGAGGGATATTTAGATAATTCAATTGTAGTTATTTATGGAGATCATAATGCTGTA
TCTAAAAATTATATACAAGAGTTATATGATTTTGTAGGAGAAAAATCACCGAATGATTTAAAATGGTATGAACTTCAAAA
GGTACCTATGCTTATACACTTCCCACAGGACGAATATAAAGGAGTAAATCATACTTATGGTGGTCAAATAGATTTATATC
CTACAATAGCTAACTTATATAATTTGCCTAGGAAATATATGTTAGGAAATGATTTATTAAATGTAGCTGACCCTAAGGTT
ACTTTTAGAAATGGATCCTTTACCGATGGAAAAGCTTTTTATATATCTTGGACAGGAGAATACTATGATATAAAAACTGG
AGAAAAGATTACTGAGACAGAGGAGTTAAAGGCTAAAAAGCAGGAAAGCGCAAAGGATTTACAAAGTTCAGATGAACTAT
TAAATCATAATTTAATAAAAAAATTAGAAAGTGAATCAAAGGGGGAAGGGGAAAGTGAGCAAAGTAAATAG

Upstream 100 bases:

>100_bases
TTTAAAATCTTTATGGGTTTAAATTAATATAATGTTTAGTAGATAAACAGAAGATAAATTTAATAATAAGTTTTATAAAT
ATTATTAGTGAGGGATGGAA

Downstream 100 bases:

>100_bases
GCTCACTTCCAAGTCTCAATTTAATAATAATAGGGTTATGTTAAGAAAATATTATACTAACATTATATTTTCTTAACATA
ACCCTATTTTATATAACATA

Product: sulfatase family protein

Products: NA

Alternate protein names: LTA synthase 2; Polyglycerol phosphate synthase 2 [H]

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYFLQKHKRTKFLYVLN
IIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLKDFIYFLDILLIIPFLKVYRNMPYKENKKIIRIGV
GSLILAGAILLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEDKEKELVDNFEGKS
QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVS
GAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKI
KTFKQPFYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV
SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVNHTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKV
TFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKDLQSSDELLNHNLIKKLESESKGEGESEQSK

Sequences:

>Translated_636_residues
MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYFLQKHKRTKFLYVLN
IIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLKDFIYFLDILLIIPFLKVYRNMPYKENKKIIRIGV
GSLILAGAILLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEDKEKELVDNFEGKS
QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVS
GAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKI
KTFKQPFYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV
SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVNHTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKV
TFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKDLQSSDELLNHNLIKKLESESKGEGESEQSK
>Mature_636_residues
MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYFLQKHKRTKFLYVLN
IIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLKDFIYFLDILLIIPFLKVYRNMPYKENKKIIRIGV
GSLILAGAILLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEDKEKELVDNFEGKS
QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVS
GAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKI
KTFKQPFYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV
SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVNHTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKV
TFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKDLQSSDELLNHNLIKKLESESKGEGESEQSK

Specific function: Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate [H]

COG id: COG1368

COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

Gene ontology:

Cell location: Processed glycerol phosphate lipoteichoic acid synthase 2:Secreted. Note=The secretion into the extracellular medium is dependent on secA and ffh [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LTA synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR012160
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 72709; Mature: 72709

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LGIGYFLQKHKRTKFLYVLNIIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSIT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFKLKDFIYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILAGAILLNGINIYKLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEE
VDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEDKEKELVDNFEGKS
CCCCCHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC
QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVA
CCCCCHHCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHCEEECCEEEEEE
AGNTSDAEFLSNNSLYPAVSGAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRN
CCCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHCHHHHHHCCCEEEEECCCCCCCCCCC
VMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQPFYSFLITLSSHFPY
EEEHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV
HHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH
SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVNHTYGGQIDLYPTIANLY
HHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCHHHCCCCCCCCCEEEEHHHHHHHH
NLPRKYMLGNDLLNVADPKVTFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKK
HCCHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHH
QESAKDLQSSDELLNHNLIKKLESESKGEGESEQSK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEKALKLKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LGIGYFLQKHKRTKFLYVLNIIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSIT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFKLKDFIYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILAGAILLNGINIYKLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEE
VDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEDKEKELVDNFEGKS
CCCCCHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC
QIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVA
CCCCCHHCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHCEEECCEEEEEE
AGNTSDAEFLSNNSLYPAVSGAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRN
CCCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHCHHHHHHCCCEEEEECCCCCCCCCCC
VMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQPFYSFLITLSSHFPY
EEEHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAV
HHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHH
SKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVNHTYGGQIDLYPTIANLY
HHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCHHHCCCCCCCCCEEEEHHHHHHHH
NLPRKYMLGNDLLNVADPKVTFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKK
HCCHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHH
QESAKDLQSSDELLNHNLIKKLESESKGEGESEQSK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377; 10658653 [H]