| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yjgA [H]
Identifier: 170756550
GI number: 170756550
Start: 2439442
End: 2439846
Strand: Reverse
Name: yjgA [H]
Synonym: CLD_2333
Alternate gene names: 170756550
Gene position: 2439846-2439442 (Counterclockwise)
Preceding gene: 170756021
Following gene: 170755430
Centisome position: 61.64
GC content: 27.16
Gene sequence:
>405_bases ATGAATCGTAAGCGTAATAGGTTAGTATATGGATTTGCTACATTCATTGTAATGTTTTTAGGATTATGTTCAAGAAAGCT AAAATATTTTATACCAGATTTTTTTAATGTATATTTAGGTGATATCCTTTGGGCACTAATGATTTTTATGTTATTTGCAT TTATTTTTAAAGGTACAAAAACAAAAATGGTTGCATTGATGGCTTTAGCATTTTCCTATCTTATTGAAATAAGTCAATTA TACCATTCTAATTGGATAGATAACATAAGAAAAACAACTGTAGGTGGATTAGTATTAGGATACGTATTTTCATGGAAAGA CTTATTAGCTTATGCTATAGGAATTGGAATAGGTATCATAGTGGAAGGCGTATTTTATTATTCTCATAATTATAGAGTTA AGTAA
Upstream 100 bases:
>100_bases AAATAATAAATTTGTATGTTAAAATATATAAGTAATGCAAGTGTGGATTTTATTTGTATTATCAATTAAATAAAAATTGT TTTAAATGAGGTTTTTTAGT
Downstream 100 bases:
>100_bases TTAAAATAGTTAATAGCCAATATAAAGCAGTTGTATATGCATTTAACTTTAATAACTAATAAATTATAGAATTGAATATA AAATAGAGCAAAAATGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MNRKRNRLVYGFATFIVMFLGLCSRKLKYFIPDFFNVYLGDILWALMIFMLFAFIFKGTKTKMVALMALAFSYLIEISQL YHSNWIDNIRKTTVGGLVLGYVFSWKDLLAYAIGIGIGIIVEGVFYYSHNYRVK
Sequences:
>Translated_134_residues MNRKRNRLVYGFATFIVMFLGLCSRKLKYFIPDFFNVYLGDILWALMIFMLFAFIFKGTKTKMVALMALAFSYLIEISQL YHSNWIDNIRKTTVGGLVLGYVFSWKDLLAYAIGIGIGIIVEGVFYYSHNYRVK >Mature_134_residues MNRKRNRLVYGFATFIVMFLGLCSRKLKYFIPDFFNVYLGDILWALMIFMLFAFIFKGTKTKMVALMALAFSYLIEISQL YHSNWIDNIRKTTVGGLVLGYVFSWKDLLAYAIGIGIGIIVEGVFYYSHNYRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021257 [H]
Pfam domain/function: PF10990 DUF2809 [H]
EC number: NA
Molecular weight: Translated: 15616; Mature: 15616
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKRNRLVYGFATFIVMFLGLCSRKLKYFIPDFFNVYLGDILWALMIFMLFAFIFKGTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TKMVALMALAFSYLIEISQLYHSNWIDNIRKTTVGGLVLGYVFSWKDLLAYAIGIGIGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEGVFYYSHNYRVK HHHHHHHCCCCCCC >Mature Secondary Structure MNRKRNRLVYGFATFIVMFLGLCSRKLKYFIPDFFNVYLGDILWALMIFMLFAFIFKGTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TKMVALMALAFSYLIEISQLYHSNWIDNIRKTTVGGLVLGYVFSWKDLLAYAIGIGIGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEGVFYYSHNYRVK HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]