| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756519
Identifier: 170756519
GI number: 170756519
Start: 3422748
End: 3423632
Strand: Reverse
Name: 170756519
Synonym: CLD_1375
Alternate gene names: NA
Gene position: 3423632-3422748 (Counterclockwise)
Preceding gene: 170754552
Following gene: 170754924
Centisome position: 86.49
GC content: 25.99
Gene sequence:
>885_bases ATGAGGTATGTTTATGTATGCAATACATCTACAGATTGTATTTCCAAAGTTTCTATAGATAATTTTAAAGAAGAAAACAA AATAACCTTAAATAATGAACTATCTACTAGAATAGGGCCTCATGGTATATGTGCATATAATGATAAATTGCTTGTAGCTA ATAGTTATAGTAATTCTCTTTCCGTAGTAGATGGAAAATTAGGAAGAGAAATTGAAAATTATTTTATAGGAATGCATTGT AATGATGTAGTTGTATATGGAGATAAAGCCTATGTTATTTGTGGTGATTTAAACAATGTAACTGTATTTGACATGGTTAA AAAGAAAATTTCAAAACAAATACCTTGCGGAGATCTACCACATAGCATAGTTATTGATAAACAAAATGAAATATTAATGA TATCAAATATGGGGACAGATAATATAACATTAATAGATTGTAAAGAAGAAAATATAGCAAAAAATATAAGAGTTGGATCT TATCCAACAAAAGCTGTTTTCACAGTAGATGGCAAATATATATTAGTATGTGAAAGTAATTTAGGTTCTGATTATAAAGG AAGTATAAGTATAATATCTAGAAAAAATTATAAACTTTTATATAGAATTCCTGTAGGAAATTCACCCGTTGATATGTGCA TTGATGAGAAGTTATGTATAGTTTCTAATTTTGGAGATGGTACTATTAGTTTAATTGATATAAATTATTATGAAAAAATA AAAGATATAATTGTTGGTGGTATGCCAAGAGGAGTGTGTAAGATAAAAGATAATATTTACGTGGGAGATAATTATAAAAA TTTATTTTTAAGGATAAATATTAGAACTAACAATAAAAAATCCATACCTATAGGTGGAGAACCTACAGGTATTTTAGTAT TATAA
Upstream 100 bases:
>100_bases ATATCATTATATAACATAAAACTTTATTGCTCAACATAAAAGATTTATCACCAAATTAGTTATTTTTCACATATTATATT ATAGAGCGAGGGGTGATAAA
Downstream 100 bases:
>100_bases TATCAGTTTTCATTTGTTGATTTTAAAATGTTTAATATTTTTGTATACATCGCACTAGAATTTTCTTTCCATTTAGAGCA GATTTCCTTTGCTTCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Cell Surface Protein; Surface Layer Protein; Beta-Propeller Fold Protein; Surface Antigen Gene; Triple Helix Repeat-Containing Collagen; YVTN Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Signal Peptide; Surface Antigen-Like Protein; Signal Peptide Protein; YVTN Family Beta-Propeller Repeat-Containing Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSLSVVDGKLGREIENYFIGMHC NDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLPHSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGS YPTKAVFTVDGKYILVCESNLGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL
Sequences:
>Translated_294_residues MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSLSVVDGKLGREIENYFIGMHC NDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLPHSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGS YPTKAVFTVDGKYILVCESNLGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL >Mature_294_residues MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSLSVVDGKLGREIENYFIGMHC NDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLPHSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGS YPTKAVFTVDGKYILVCESNLGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32757; Mature: 32757
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSL CEEEEEECCCHHHHEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCE SVVDGKLGREIENYFIGMHCNDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLP EEECCHHCCCEEHEEEEEECCCEEEECCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCC HSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGSYPTKAVFTVDGKYILVCESN CEEEEECCCCEEEEEECCCCCEEEEEECCCCCHHCEEECCCCCEEEEEECCCEEEEECCC LGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI CCCCCCCEEEEEEECCEEEEEEECCCCCCHHEEECCCEEEEEECCCCEEEEEEEHHHHHH KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL HHHHCCCCCCCEEEEECCEEECCCCEEEEEEEEEEECCCEECCCCCCCCEEEEC >Mature Secondary Structure MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSL CEEEEEECCCHHHHEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCE SVVDGKLGREIENYFIGMHCNDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLP EEECCHHCCCEEHEEEEEECCCEEEECCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCC HSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGSYPTKAVFTVDGKYILVCESN CEEEEECCCCEEEEEECCCCCEEEEEECCCCCHHCEEECCCCCEEEEEECCCEEEEECCC LGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI CCCCCCCEEEEEEECCEEEEEEECCCCCCHHEEECCCEEEEEECCCCEEEEEEEHHHHHH KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL HHHHCCCCCCCEEEEECCEEECCCCEEEEEEEEEEECCCEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA