Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756519

Identifier: 170756519

GI number: 170756519

Start: 3422748

End: 3423632

Strand: Reverse

Name: 170756519

Synonym: CLD_1375

Alternate gene names: NA

Gene position: 3423632-3422748 (Counterclockwise)

Preceding gene: 170754552

Following gene: 170754924

Centisome position: 86.49

GC content: 25.99

Gene sequence:

>885_bases
ATGAGGTATGTTTATGTATGCAATACATCTACAGATTGTATTTCCAAAGTTTCTATAGATAATTTTAAAGAAGAAAACAA
AATAACCTTAAATAATGAACTATCTACTAGAATAGGGCCTCATGGTATATGTGCATATAATGATAAATTGCTTGTAGCTA
ATAGTTATAGTAATTCTCTTTCCGTAGTAGATGGAAAATTAGGAAGAGAAATTGAAAATTATTTTATAGGAATGCATTGT
AATGATGTAGTTGTATATGGAGATAAAGCCTATGTTATTTGTGGTGATTTAAACAATGTAACTGTATTTGACATGGTTAA
AAAGAAAATTTCAAAACAAATACCTTGCGGAGATCTACCACATAGCATAGTTATTGATAAACAAAATGAAATATTAATGA
TATCAAATATGGGGACAGATAATATAACATTAATAGATTGTAAAGAAGAAAATATAGCAAAAAATATAAGAGTTGGATCT
TATCCAACAAAAGCTGTTTTCACAGTAGATGGCAAATATATATTAGTATGTGAAAGTAATTTAGGTTCTGATTATAAAGG
AAGTATAAGTATAATATCTAGAAAAAATTATAAACTTTTATATAGAATTCCTGTAGGAAATTCACCCGTTGATATGTGCA
TTGATGAGAAGTTATGTATAGTTTCTAATTTTGGAGATGGTACTATTAGTTTAATTGATATAAATTATTATGAAAAAATA
AAAGATATAATTGTTGGTGGTATGCCAAGAGGAGTGTGTAAGATAAAAGATAATATTTACGTGGGAGATAATTATAAAAA
TTTATTTTTAAGGATAAATATTAGAACTAACAATAAAAAATCCATACCTATAGGTGGAGAACCTACAGGTATTTTAGTAT
TATAA

Upstream 100 bases:

>100_bases
ATATCATTATATAACATAAAACTTTATTGCTCAACATAAAAGATTTATCACCAAATTAGTTATTTTTCACATATTATATT
ATAGAGCGAGGGGTGATAAA

Downstream 100 bases:

>100_bases
TATCAGTTTTCATTTGTTGATTTTAAAATGTTTAATATTTTTGTATACATCGCACTAGAATTTTCTTTCCATTTAGAGCA
GATTTCCTTTGCTTCTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Cell Surface Protein; Surface Layer Protein; Beta-Propeller Fold Protein; Surface Antigen Gene; Triple Helix Repeat-Containing Collagen; YVTN Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Signal Peptide; Surface Antigen-Like Protein; Signal Peptide Protein; YVTN Family Beta-Propeller Repeat-Containing Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSLSVVDGKLGREIENYFIGMHC
NDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLPHSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGS
YPTKAVFTVDGKYILVCESNLGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI
KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL

Sequences:

>Translated_294_residues
MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSLSVVDGKLGREIENYFIGMHC
NDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLPHSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGS
YPTKAVFTVDGKYILVCESNLGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI
KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL
>Mature_294_residues
MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSLSVVDGKLGREIENYFIGMHC
NDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLPHSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGS
YPTKAVFTVDGKYILVCESNLGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI
KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32757; Mature: 32757

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSL
CEEEEEECCCHHHHEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCE
SVVDGKLGREIENYFIGMHCNDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLP
EEECCHHCCCEEHEEEEEECCCEEEECCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCC
HSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGSYPTKAVFTVDGKYILVCESN
CEEEEECCCCEEEEEECCCCCEEEEEECCCCCHHCEEECCCCCEEEEEECCCEEEEECCC
LGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI
CCCCCCCEEEEEEECCEEEEEEECCCCCCHHEEECCCEEEEEECCCCEEEEEEEHHHHHH
KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL
HHHHCCCCCCCEEEEECCEEECCCCEEEEEEEEEEECCCEECCCCCCCCEEEEC
>Mature Secondary Structure
MRYVYVCNTSTDCISKVSIDNFKEENKITLNNELSTRIGPHGICAYNDKLLVANSYSNSL
CEEEEEECCCHHHHEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCE
SVVDGKLGREIENYFIGMHCNDVVVYGDKAYVICGDLNNVTVFDMVKKKISKQIPCGDLP
EEECCHHCCCEEHEEEEEECCCEEEECCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCC
HSIVIDKQNEILMISNMGTDNITLIDCKEENIAKNIRVGSYPTKAVFTVDGKYILVCESN
CEEEEECCCCEEEEEECCCCCEEEEEECCCCCHHCEEECCCCCEEEEEECCCEEEEECCC
LGSDYKGSISIISRKNYKLLYRIPVGNSPVDMCIDEKLCIVSNFGDGTISLIDINYYEKI
CCCCCCCEEEEEEECCEEEEEEECCCCCCHHEEECCCEEEEEECCCCEEEEEEEHHHHHH
KDIIVGGMPRGVCKIKDNIYVGDNYKNLFLRINIRTNNKKSIPIGGEPTGILVL
HHHHCCCCCCCEEEEECCEEECCCCEEEEEEEEEEECCCEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA