| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756507
Identifier: 170756507
GI number: 170756507
Start: 2903623
End: 2903964
Strand: Reverse
Name: 170756507
Synonym: CLD_1842
Alternate gene names: NA
Gene position: 2903964-2903623 (Counterclockwise)
Preceding gene: 170755113
Following gene: 170755201
Centisome position: 73.37
GC content: 19.59
Gene sequence:
>342_bases ATGAATGAGTTAAGGAATAAATTAATAAAATTTAGAGAAATAACATTAAATATAATAGATTCTTTAGAAAAGGAAGACTA TGATACACCAGAAAAGTTATTAGGACAACGAGATAATATAATAAAAGAAATAAATAATTTAAATTACAAAAAAGAAGAGT TTAAAAAAATAGATGAAGAATTGGAACTTTTATTAATAGAAAAGAAACTACAAAACCTTATGGTAGAAAAAAAAGCAAAG ATAAAACAAAAACTAAAAAAAACTTCAGAGAATAAAGAAGCAAATAAAAATTATAGTACAAAACAATTTAGCACACAAAA TATATTAAATACAAAAATATAA
Upstream 100 bases:
>100_bases ATTATTATCAATTTGCACAATTGGAAAAATATATGAGTCAAATGAATTCTCAATCTGCATGGCTTGCCCAACAATTAGGT GGGGGACAATAAGGATAAAA
Downstream 100 bases:
>100_bases AAAACTTATAAAGTATAAAAAAAGAAATTCGATATAATTAATGTAAGATAAATGCAAATAAATAAGTTATAAAAATATAA AAAAGGTATAAAGTATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MNELRNKLIKFREITLNIIDSLEKEDYDTPEKLLGQRDNIIKEINNLNYKKEEFKKIDEELELLLIEKKLQNLMVEKKAK IKQKLKKTSENKEANKNYSTKQFSTQNILNTKI
Sequences:
>Translated_113_residues MNELRNKLIKFREITLNIIDSLEKEDYDTPEKLLGQRDNIIKEINNLNYKKEEFKKIDEELELLLIEKKLQNLMVEKKAK IKQKLKKTSENKEANKNYSTKQFSTQNILNTKI >Mature_113_residues MNELRNKLIKFREITLNIIDSLEKEDYDTPEKLLGQRDNIIKEINNLNYKKEEFKKIDEELELLLIEKKLQNLMVEKKAK IKQKLKKTSENKEANKNYSTKQFSTQNILNTKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13542; Mature: 13542
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELRNKLIKFREITLNIIDSLEKEDYDTPEKLLGQRDNIIKEINNLNYKKEEFKKIDEE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH LELLLIEKKLQNLMVEKKAKIKQKLKKTSENKEANKNYSTKQFSTQNILNTKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNELRNKLIKFREITLNIIDSLEKEDYDTPEKLLGQRDNIIKEINNLNYKKEEFKKIDEE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH LELLLIEKKLQNLMVEKKAKIKQKLKKTSENKEANKNYSTKQFSTQNILNTKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA