Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is yebN [C]

Identifier: 170756491

GI number: 170756491

Start: 494692

End: 495243

Strand: Direct

Name: yebN [C]

Synonym: CLD_0355

Alternate gene names: 170756491

Gene position: 494692-495243 (Clockwise)

Preceding gene: 170757660

Following gene: 170754652

Centisome position: 12.5

GC content: 24.82

Gene sequence:

>552_bases
ATGGAAGTACAAGAACTCTTTTTACTAGCTTTAGCAATCTCTTTAGATGCTTTTGGAGTAATACTGTGCATTGGCATAAA
TAAAGGTATTACTTTAAAATCAAGCATGATTTTTGTTTTTTCTTTTGGATTTTTTCAGTTTTTTCTTTCCTTTCTGGGTG
GATACATAGGTACTATTTTTAATAAATATATAGTCCCAATACCAACTATTGTAGGTGGCTTAATAATAATAATAGTAGGA
ATACTCATGATAACAGAGGGTTTTAAAGAAAAAGAAGAAAGTATATTTTTGAATAAAATTATGTATCTTATATTGGGTGT
TTCTGTCAGCATAGATGCTTTAGTTATAGGTTTTACAACTTTAAGTTATATTAACAATTTGTTTTATTTATTTATGAGTT
CTTTGTTTATGGGATTAATCGCTACAATAATTTGCAGCTTAGGAATTATTTTATCTAAATATATTAAAAAAATATCTATA
ATCTCAAGTTATGCAGATTATATAGGAGGAATAATATTAATATTATTTGGTTTGAAAATGTTATTTTTTTAA

Upstream 100 bases:

>100_bases
ATTAAATAAAATAAATAACTTTGCTCGTTATAAAAGTAGCATTATATATATATAAATAGTTAAGAAAGCATTTATTATTT
AATATTAATAGGGGGATATG

Downstream 100 bases:

>100_bases
AATTATTAATAGGTATTGAGTTATGTTTACTAATTATTGTATTATTATCATAAGGTGATAATTATGATAGAAGAGGAATT
ATTGAAGAAAAACAATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIFNKYIVPIPTIVGGLIIIIVG
ILMITEGFKEKEESIFLNKIMYLILGVSVSIDALVIGFTTLSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISI
ISSYADYIGGIILILFGLKMLFF

Sequences:

>Translated_183_residues
MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIFNKYIVPIPTIVGGLIIIIVG
ILMITEGFKEKEESIFLNKIMYLILGVSVSIDALVIGFTTLSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISI
ISSYADYIGGIILILFGLKMLFF
>Mature_183_residues
MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIFNKYIVPIPTIVGGLIIIIVG
ILMITEGFKEKEESIFLNKIMYLILGVSVSIDALVIGFTTLSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISI
ISSYADYIGGIILILFGLKMLFF

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y394_CLOBH (A5HYT8)

Other databases:

- EMBL:   AM412317
- RefSeq:   YP_001252938.1
- GeneID:   5184649
- GenomeReviews:   AM412317_GR
- KEGG:   cbo:CBO0394
- eggNOG:   COG1971
- HOGENOM:   HBG709685
- OMA:   FIGRHAK
- ProtClustDB:   CLSK882643
- BioCyc:   CBOT36826:CBO0394-MONOMER
- HAMAP:   MF_01521
- InterPro:   IPR003810
- InterPro:   IPR022929

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 20277; Mature: 20277

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x19f25be8)-; HASH(0x1b64b0ec)-; HASH(0x1afd2348)-; HASH(0x1b8d064c)-; HASH(0x1a85c900)-; HASH(0x1a55b0a4)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIF
CCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKYIVPIPTIVGGLIIIIVGILMITEGFKEKEESIFLNKIMYLILGVSVSIDALVIGFTT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISIISSYADYIGGIILILFGLKM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFF
HHH
>Mature Secondary Structure
MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIF
CCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKYIVPIPTIVGGLIIIIVGILMITEGFKEKEESIFLNKIMYLILGVSVSIDALVIGFTT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISIISSYADYIGGIILILFGLKM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFF
HHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA