Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756490

Identifier: 170756490

GI number: 170756490

Start: 3163789

End: 3164439

Strand: Reverse

Name: 170756490

Synonym: CLD_1627

Alternate gene names: NA

Gene position: 3164439-3163789 (Counterclockwise)

Preceding gene: 170756803

Following gene: 170754741

Centisome position: 79.95

GC content: 20.12

Gene sequence:

>651_bases
ATGCTAAATTTAATAAAAAAGGATTTAATTATTATTAAGTCCTATATAATTAAAACTTTAGCTATTTTAGCACTTTATAT
GTTTATTTTTGATAAAACAGATAAACAAGGCATATGTATACTTAGTATTTATTTAGTAGTATATATACTTATTTCAATGT
CCTTTTATTATAGAGAAAGAGTAAAGGAGGACTATATGCTAAAATCCCTTCCAGTTAAGAAAAATGAGGTGGTTTTAGCT
AAGTATACTTCTGTAATAATATACTTTATAGCATCTTTAATATTAATGTATATAATTAATTTTATAGCTTATATATTAAA
TTTTAAAGATATAATTGAATTTCCACAAATTAGCACCATTTTTTTAAGTTTGAGTATTATATTTATTTCTATGGCAATAC
AATTACCTATATATTTTAAACTTGATCATAGTAAGGCAAGGATTGTAAATACTTTTGTATATGGTGGTATTTTTGCTGTG
TTATATATTATATATGATAATAATCATTTTAATAATTATATGAAAACTTATAATGTTAGTAATAATATATATGAAAAATT
TATTTTAATATCCACAATAATAAGCATAATTTTATTTATTATATCTGCTATTTTATCCATGAGAATATATGAAAAGAAAG
AGAGTATGTAA

Upstream 100 bases:

>100_bases
AGCTAATATTATAAGAGAAATAACCCAAAAAGGAGAAATTATAATAGAAAAGCCAAGTTTGGAGGATATTATGGTTTATA
CAGTAAGGGGGTAAGAATAA

Downstream 100 bases:

>100_bases
CATGAAGAGTATTATTGACTTAATAATTAATGATTTAATATTATGTAGAAAAATTTTTTTAGTTTCTATACCTATGATAA
TATTCTTGGCCTTTACAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MLNLIKKDLIIIKSYIIKTLAILALYMFIFDKTDKQGICILSIYLVVYILISMSFYYRERVKEDYMLKSLPVKKNEVVLA
KYTSVIIYFIASLILMYIINFIAYILNFKDIIEFPQISTIFLSLSIIFISMAIQLPIYFKLDHSKARIVNTFVYGGIFAV
LYIIYDNNHFNNYMKTYNVSNNIYEKFILISTIISIILFIISAILSMRIYEKKESM

Sequences:

>Translated_216_residues
MLNLIKKDLIIIKSYIIKTLAILALYMFIFDKTDKQGICILSIYLVVYILISMSFYYRERVKEDYMLKSLPVKKNEVVLA
KYTSVIIYFIASLILMYIINFIAYILNFKDIIEFPQISTIFLSLSIIFISMAIQLPIYFKLDHSKARIVNTFVYGGIFAV
LYIIYDNNHFNNYMKTYNVSNNIYEKFILISTIISIILFIISAILSMRIYEKKESM
>Mature_216_residues
MLNLIKKDLIIIKSYIIKTLAILALYMFIFDKTDKQGICILSIYLVVYILISMSFYYRERVKEDYMLKSLPVKKNEVVLA
KYTSVIIYFIASLILMYIINFIAYILNFKDIIEFPQISTIFLSLSIIFISMAIQLPIYFKLDHSKARIVNTFVYGGIFAV
LYIIYDNNHFNNYMKTYNVSNNIYEKFILISTIISIILFIISAILSMRIYEKKESM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25442; Mature: 25442

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLIKKDLIIIKSYIIKTLAILALYMFIFDKTDKQGICILSIYLVVYILISMSFYYRER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VKEDYMLKSLPVKKNEVVLAKYTSVIIYFIASLILMYIINFIAYILNFKDIIEFPQISTI
HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FLSLSIIFISMAIQLPIYFKLDHSKARIVNTFVYGGIFAVLYIIYDNNHFNNYMKTYNVS
HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
NNIYEKFILISTIISIILFIISAILSMRIYEKKESM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNLIKKDLIIIKSYIIKTLAILALYMFIFDKTDKQGICILSIYLVVYILISMSFYYRER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VKEDYMLKSLPVKKNEVVLAKYTSVIIYFIASLILMYIINFIAYILNFKDIIEFPQISTI
HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FLSLSIIFISMAIQLPIYFKLDHSKARIVNTFVYGGIFAVLYIIYDNNHFNNYMKTYNVS
HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
NNIYEKFILISTIISIILFIISAILSMRIYEKKESM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA