| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756478
Identifier: 170756478
GI number: 170756478
Start: 3503338
End: 3504063
Strand: Reverse
Name: 170756478
Synonym: CLD_1305
Alternate gene names: NA
Gene position: 3504063-3503338 (Counterclockwise)
Preceding gene: 170757263
Following gene: 170756913
Centisome position: 88.53
GC content: 23.69
Gene sequence:
>726_bases ATGGAGCTAATAAAAAGCATTCTTACATTTATAATATTATGGATACCCCCTATAATATTATTTTTTAGAATAAAGCCAAA GAAAAATAATATATTCATAAGTGTTATTATTTTTATAGTTTATATAATAGGATCTTTATTTACACAAAATCTTTTCCCAT TTGTATTAACGCTGATGGATATATTTCAATTAAGAAAAAGGTACGGATTATCTCAAGAATTTCATGAATTTAAATATAAT GATGATTATCATAGGTTTAAATTCAATATATCTAGTTTTTCATTTATAAAAGGTATACAGTATGCCCTAATATCTTATTT AGGATATATTCTAATAATGATTATATTTAATATTATATCTAATTCACTAAAGTTAAATTTAAAAGAGCAGGATGTAGTTA CATGGCTTTCTAGCATGCCTTTAAATAAATTTTTAATAGTTATACCCGTGACTGTTATATTTGCACCAGTGGCAGAGGAG TTTGTTTTTAGGTGGTATATATTTGAAAAGATGTTAAATAAAAGATTAGGAATAGTATTAGCAGCTATTATAAGTAGTAT ACTTTTTGGAATTGTTCATTTTAATGTAAAGGTATTTCCTGCCCTGGTATTTATAGCTGTATTTAATTGCTATTTAATAC ATAAAGAAGGATTTTGGTATGCTGTATTTAATCATTTTGTATTTAATTTTGTTAATACAGCTATGATATTTTTAACTAAA CTATAA
Upstream 100 bases:
>100_bases ACGATAAGATTTTGTTAATATCTTCATTAAGTAAAGAAGGAAAAGAAGAAGTCTTAGAACAAATATTAGTTTACTAGATT AGATTTAGGGGGAGGATATA
Downstream 100 bases:
>100_bases TATATAATTATTATAAACAGAGTTCTTGGTTTCAGAGGGAGTTTTACTCCCTCTGAAGCTTATTAACAGACTTCTTAGGA GTTTCACTCCTTAGAAGTCG
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: Protease
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MELIKSILTFIILWIPPIILFFRIKPKKNNIFISVIIFIVYIIGSLFTQNLFPFVLTLMDIFQLRKRYGLSQEFHEFKYN DDYHRFKFNISSFSFIKGIQYALISYLGYILIMIIFNIISNSLKLNLKEQDVVTWLSSMPLNKFLIVIPVTVIFAPVAEE FVFRWYIFEKMLNKRLGIVLAAIISSILFGIVHFNVKVFPALVFIAVFNCYLIHKEGFWYAVFNHFVFNFVNTAMIFLTK L
Sequences:
>Translated_241_residues MELIKSILTFIILWIPPIILFFRIKPKKNNIFISVIIFIVYIIGSLFTQNLFPFVLTLMDIFQLRKRYGLSQEFHEFKYN DDYHRFKFNISSFSFIKGIQYALISYLGYILIMIIFNIISNSLKLNLKEQDVVTWLSSMPLNKFLIVIPVTVIFAPVAEE FVFRWYIFEKMLNKRLGIVLAAIISSILFGIVHFNVKVFPALVFIAVFNCYLIHKEGFWYAVFNHFVFNFVNTAMIFLTK L >Mature_241_residues MELIKSILTFIILWIPPIILFFRIKPKKNNIFISVIIFIVYIIGSLFTQNLFPFVLTLMDIFQLRKRYGLSQEFHEFKYN DDYHRFKFNISSFSFIKGIQYALISYLGYILIMIIFNIISNSLKLNLKEQDVVTWLSSMPLNKFLIVIPVTVIFAPVAEE FVFRWYIFEKMLNKRLGIVLAAIISSILFGIVHFNVKVFPALVFIAVFNCYLIHKEGFWYAVFNHFVFNFVNTAMIFLTK L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28496; Mature: 28496
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIKSILTFIILWIPPIILFFRIKPKKNNIFISVIIFIVYIIGSLFTQNLFPFVLTLMD CHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFQLRKRYGLSQEFHEFKYNDDYHRFKFNISSFSFIKGIQYALISYLGYILIMIIFNIIS HHHHHHHHCCCHHHHHCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSLKLNLKEQDVVTWLSSMPLNKFLIVIPVTVIFAPVAEEFVFRWYIFEKMLNKRLGIVL HHHEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAIISSILFGIVHFNVKVFPALVFIAVFNCYLIHKEGFWYAVFNHFVFNFVNTAMIFLTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHC L C >Mature Secondary Structure MELIKSILTFIILWIPPIILFFRIKPKKNNIFISVIIFIVYIIGSLFTQNLFPFVLTLMD CHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFQLRKRYGLSQEFHEFKYNDDYHRFKFNISSFSFIKGIQYALISYLGYILIMIIFNIIS HHHHHHHHCCCHHHHHCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSLKLNLKEQDVVTWLSSMPLNKFLIVIPVTVIFAPVAEEFVFRWYIFEKMLNKRLGIVL HHHEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAIISSILFGIVHFNVKVFPALVFIAVFNCYLIHKEGFWYAVFNHFVFNFVNTAMIFLTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA