| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756454
Identifier: 170756454
GI number: 170756454
Start: 2835734
End: 2835943
Strand: Reverse
Name: 170756454
Synonym: CLD_1910
Alternate gene names: NA
Gene position: 2835943-2835734 (Counterclockwise)
Preceding gene: 170756722
Following gene: 170755265
Centisome position: 71.65
GC content: 30.48
Gene sequence:
>210_bases ATGATTCAGCTAACAGGTATGAACCGTGAAGGCTTTACTTTGAATGCAGAACATATTGAAAAAATTGAACAGGTACCAGA AAGTTTAATCACCTTAGTAAATGGCAAAAAATATATAGTTATAGAAACACCAAATGAAATAATAGAAAAAGTTAAAAAAT ACAAAAGTGACATAATCACTTTAGGCATACAGGGGGAGTTTAGGAAATGA
Upstream 100 bases:
>100_bases TTACAGAAAGTATAGACTATAATTTTGAAAGGTTAAATTTCCAATTTTAAATCATGAAATCTAAATTTTAAAACTTTAAC TAATAAAAGGGGGGATTATA
Downstream 100 bases:
>100_bases AAAAGAGAGATATATTAACACCTATAGGACTTGTTCTCTGCTTTGGACTTATTATATGGGGAATGGCTACCGGTGGATCT AATCTTAAAGTCTTTTGGGA
Product: flagellar protein FlbD
Products: NA
Alternate protein names: Flagellar Protein FlbD; Flagellar Protein; Flagellar Protein FlbD -Related Protein
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MIQLTGMNREGFTLNAEHIEKIEQVPESLITLVNGKKYIVIETPNEIIEKVKKYKSDIITLGIQGEFRK
Sequences:
>Translated_69_residues MIQLTGMNREGFTLNAEHIEKIEQVPESLITLVNGKKYIVIETPNEIIEKVKKYKSDIITLGIQGEFRK >Mature_69_residues MIQLTGMNREGFTLNAEHIEKIEQVPESLITLVNGKKYIVIETPNEIIEKVKKYKSDIITLGIQGEFRK
Specific function: Unknown
COG id: COG1582
COG function: function code N; Uncharacterized protein, possibly involved in motility
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7931; Mature: 7931
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLTGMNREGFTLNAEHIEKIEQVPESLITLVNGKKYIVIETPNEIIEKVKKYKSDIIT CEEECCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCEEE LGIQGEFRK EECCCCCCC >Mature Secondary Structure MIQLTGMNREGFTLNAEHIEKIEQVPESLITLVNGKKYIVIETPNEIIEKVKKYKSDIIT CEEECCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCEEE LGIQGEFRK EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA