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The map label for this gene is hsp18 [H]

Identifier: 170756430

GI number: 170756430

Start: 941467

End: 941907

Strand: Direct

Name: hsp18 [H]

Synonym: CLD_3741

Alternate gene names: 170756430

Gene position: 941467-941907 (Clockwise)

Preceding gene: 170755194

Following gene: 170757276

Centisome position: 23.79

GC content: 27.44

Gene sequence:

>441_bases
ATGTTTGAACTGATTCCTTTTAGAGAAGATGATTTAAATGGACGAGATGATTTTTTTTCACCATCTCTAAAAAATTTCGT
TAATGATGATTCCTTTACAGAAATGAGTAATGTCCATAAAAACTTTAATGTGGATTTAAAAGAAACAGATGAAAACTATT
TAATAGAAGCGGATCTTCCGGGAACAAAAAAAGAGGATATATCTATAGATTTTCATAACAATTATTTAGTAATCAATGCA
GAAAGGCAAGAATCAGTAGAAAATAAAAAAGAAAACTATGTTAGACGTGAAAGACGTTATGGTGAATTTAAGAGAAGCTT
CTATATAGATGATGCTGATGAAAATAAAATAGATGCTTCATTTAATAATGGGGTTTTAAAGATTACTATTCCTAAAACAA
ACAAAGATAACAACAAAAGAAAAAAGATTGAGATACATTAG

Upstream 100 bases:

>100_bases
TATTATATTCCTCTAATAATAATTATATAGTTTGATACTATATTAATGTTTAATATAAAAGGAACAAAACACCTAAATTA
AACAAAGGAGGAATTTAATA

Downstream 100 bases:

>100_bases
AAATATAAATTAAAATATTAGTTATTAAAAATAGTAAAATTATTTAAATTTTAAAATAACTATTGCTCATTACCTTACGT
CATGTGTTAATATAATATTA

Product: heat shock protein

Products: NA

Alternate protein names: HSP 18 [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MFELIPFREDDLNGRDDFFSPSLKNFVNDDSFTEMSNVHKNFNVDLKETDENYLIEADLPGTKKEDISIDFHNNYLVINA
ERQESVENKKENYVRRERRYGEFKRSFYIDDADENKIDASFNNGVLKITIPKTNKDNNKRKKIEIH

Sequences:

>Translated_146_residues
MFELIPFREDDLNGRDDFFSPSLKNFVNDDSFTEMSNVHKNFNVDLKETDENYLIEADLPGTKKEDISIDFHNNYLVINA
ERQESVENKKENYVRRERRYGEFKRSFYIDDADENKIDASFNNGVLKITIPKTNKDNNKRKKIEIH
>Mature_146_residues
MFELIPFREDDLNGRDDFFSPSLKNFVNDDSFTEMSNVHKNFNVDLKETDENYLIEADLPGTKKEDISIDFHNNYLVINA
ERQESVENKKENYVRRERRYGEFKRSFYIDDADENKIDASFNNGVLKITIPKTNKDNNKRKKIEIH

Specific function: Probable chaperone [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17362; Mature: 17362

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELIPFREDDLNGRDDFFSPSLKNFVNDDSFTEMSNVHKNFNVDLKETDENYLIEADLP
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCEEEEECCC
GTKKEDISIDFHNNYLVINAERQESVENKKENYVRRERRYGEFKRSFYIDDADENKIDAS
CCCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCEEECC
FNNGVLKITIPKTNKDNNKRKKIEIH
CCCCEEEEEECCCCCCCCCEEEEEEC
>Mature Secondary Structure
MFELIPFREDDLNGRDDFFSPSLKNFVNDDSFTEMSNVHKNFNVDLKETDENYLIEADLP
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCEEEEECCC
GTKKEDISIDFHNNYLVINAERQESVENKKENYVRRERRYGEFKRSFYIDDADENKIDAS
CCCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCEEECC
FNNGVLKITIPKTNKDNNKRKKIEIH
CCCCEEEEEECCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501044; 11466286 [H]