| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is aroH
Identifier: 170756396
GI number: 170756396
Start: 1929236
End: 1929607
Strand: Reverse
Name: aroH
Synonym: CLD_2831
Alternate gene names: 170756396
Gene position: 1929607-1929236 (Counterclockwise)
Preceding gene: 170754437
Following gene: 170755162
Centisome position: 48.75
GC content: 26.61
Gene sequence:
>372_bases ATGCAGTCTATAAGAGGGGCTATAACTATAGAAAAAAATGAAGTGAAACATATTGAAGAAGCTTCAATAAAACTTTTTTC AGAAATATTAGCAAGAAACAATTTAAATATAGAAGATATAGTATCTATATTTATATCCTGTACAAATGACATAGATAAGG GCTACCCTGGGAAATATATTAGAGAGGATTTTAATTTGAAAAATATAGCTATAATGCATTTTAATGAAATGTATGTTGAA GGTTCCATGCCTTTATGCATAAGGATTTTAATTCTAATAGACAAAAAAAATAAAAATATAGAAGAAAATACAGAGTATGT TTATCTTGGCAGGGCAAAGACTCTTAGAAAAGATTTGTTTTCACCAAATTAA
Upstream 100 bases:
>100_bases CAGGAGAGTTAATAGACGTAGATGCTTTTACTGGTGGATTTAATATACAAATAGCTCTATCTACAGGTTATTTGGCTGGT TTAAAGGTAGGTGAAAATTG
Downstream 100 bases:
>100_bases AGGAATTTTTATAGATTTTATAGAATATAAAATTATATAGTGTTAATTATAAATGCATTAAGGAAAGGCGGAATAATGTT GGATATATCTATAGCCATAG
Product: chorismate mutase
Products: NA
Alternate protein names: CM [H]
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MQSIRGAITIEKNEVKHIEEASIKLFSEILARNNLNIEDIVSIFISCTNDIDKGYPGKYIREDFNLKNIAIMHFNEMYVE GSMPLCIRILILIDKKNKNIEENTEYVYLGRAKTLRKDLFSPN
Sequences:
>Translated_123_residues MQSIRGAITIEKNEVKHIEEASIKLFSEILARNNLNIEDIVSIFISCTNDIDKGYPGKYIREDFNLKNIAIMHFNEMYVE GSMPLCIRILILIDKKNKNIEENTEYVYLGRAKTLRKDLFSPN >Mature_123_residues MQSIRGAITIEKNEVKHIEEASIKLFSEILARNNLNIEDIVSIFISCTNDIDKGYPGKYIREDFNLKNIAIMHFNEMYVE GSMPLCIRILILIDKKNKNIEENTEYVYLGRAKTLRKDLFSPN
Specific function: Unknown
COG id: COG4401
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 chorismate mutase aroH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008243 - InterPro: IPR013813 - ProDom: PD031888 [H]
Pfam domain/function: PF07736 CM_1 [H]
EC number: =5.4.99.5 [H]
Molecular weight: Translated: 14284; Mature: 14284
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIRGAITIEKNEVKHIEEASIKLFSEILARNNLNIEDIVSIFISCTNDIDKGYPGKYI CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHH REDFNLKNIAIMHFNEMYVEGSMPLCIRILILIDKKNKNIEENTEYVYLGRAKTLRKDLF HCCCCCCEEEEEEEEEEEECCCCCHHEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHCC SPN CCC >Mature Secondary Structure MQSIRGAITIEKNEVKHIEEASIKLFSEILARNNLNIEDIVSIFISCTNDIDKGYPGKYI CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHH REDFNLKNIAIMHFNEMYVEGSMPLCIRILILIDKKNKNIEENTEYVYLGRAKTLRKDLF HCCCCCCEEEEEEEEEEEECCCCCHHEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHCC SPN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2105742; 9384377; 8471608; 8378335; 8046752; 10818343 [H]