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The map label for this gene is yndE [H]

Identifier: 170756366

GI number: 170756366

Start: 2498681

End: 2499787

Strand: Reverse

Name: yndE [H]

Synonym: CLD_2262

Alternate gene names: 170756366

Gene position: 2499787-2498681 (Counterclockwise)

Preceding gene: 170754886

Following gene: 170757425

Centisome position: 63.15

GC content: 25.2

Gene sequence:

>1107_bases
ATGGAAAATAAAAGTAATAATGTGTTAACTACAAATCAAACTATGCTTATGATAGTGGGATCTATGATAGGAATAGGGAT
ATTATCTCTTCCAGCTAATTTAACTAAGATAGCTCACAATGATGGGTGGATTGGAGTAATTATAGGAAGCTTATATCCTT
TTTATATGGTACTTTGTGCTATATTAATATTCAAAGATAATTCTTACCACAACACCAATATAGTGGAAATAAGCAAGAAC
TATTTTGGAAAAATTTTAGGTAGTGTATTTTCTTTTGTATTTGCTTTCCAATATTTTATTTATACAATTATTACCACTGC
TAATATAAGTAATTTATTAAGGGTTCATTTAGTTTTATTTTTAGAGCAATATAAATTAGCCATTCCAATACTATTAATTT
CAGTATATGCTGCTTCTAAAGGCATAAAATCCTTAGGTATAATAAATGAAATTATTTTTTATGCAGCTATCCCATTAATT
TTAATAACTTTTTTGGCAGCAAAGCAAGGCAATATTCTCAATATTCAACCTATATTAGGAACTCCAATTTCCTCTATTTT
AAAGGCTAGTATAGAGACTGTATATTCTTTTTTAGGTATAGAAATTATTTTTTTAATAGTTCCTTTAATGGAGGATAAAA
ATAAGATAAGGAGTTCCTTTTTAAAAAGTACATTAATTGTAGTTGTTGTATATATATGGCTAAGTTTCATATCCATATAT
TACTTGGGTCCAGATGTAACAAAAAATTTGTATTGGCCTACTTTATCCCTTGCAGAAACAATTTATGTACCTGGTATAAG
TAATTTTAAACTTGTGTTTATATTTTTGTGGAATAGTATAGTATTTCAAACTATAGCTAATCAGAGTTATTTTTTCTATT
ATTCACTGTCCAGCATGTTTAAAAAAATAAACTCTAATATCTTATATATCATAGTATTTATCTTTGCTGCTATAATTGTT
AATAAGCTAGATAGTTTTATAACTCTTACAAAAATCAATAAATATATTAATGTATTTTATTTAACATTTAATCTAATTTT
TATAACAAGTATAACTATTATAAAAATTATAAAAAGCAGATGGAAAAGTCAACTAACCCACGAATAA

Upstream 100 bases:

>100_bases
AATAATATATAGAAATATAGTCTAGGTATATATGTTGGATTAAAAGAATTTGGCATAATAAGCGATGGTAGTTTATGAAA
AAATTTAAGGGAGAGCTATA

Downstream 100 bases:

>100_bases
ATATTTTTAAAAGAGTTATTGTTATTATAATTTTAAACATATATTATTTGTAATTTAGACCTAGTATGTTTCTAATGATA
TTTTGATATGGCTAGAGAAA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAHNDGWIGVIIGSLYPFYMVLCAILIFKDNSYHNTNIVEISKN
YFGKILGSVFSFVFAFQYFIYTIITTANISNLLRVHLVLFLEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLI
LITFLAAKQGNILNIQPILGTPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMFKKINSNILYIIVFIFAAIIV
NKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSRWKSQLTHE

Sequences:

>Translated_368_residues
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAHNDGWIGVIIGSLYPFYMVLCAILIFKDNSYHNTNIVEISKN
YFGKILGSVFSFVFAFQYFIYTIITTANISNLLRVHLVLFLEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLI
LITFLAAKQGNILNIQPILGTPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMFKKINSNILYIIVFIFAAIIV
NKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSRWKSQLTHE
>Mature_368_residues
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAHNDGWIGVIIGSLYPFYMVLCAILIFKDNSYHNTNIVEISKN
YFGKILGSVFSFVFAFQYFIYTIITTANISNLLRVHLVLFLEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLI
LITFLAAKQGNILNIQPILGTPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMFKKINSNILYIIVFIFAAIIV
NKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSRWKSQLTHE

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41848; Mature: 41848

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAHNDGWIGVIIGSLYPFYMVLCA
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ILIFKDNSYHNTNIVEISKNYFGKILGSVFSFVFAFQYFIYTIITTANISNLLRVHLVLF
HHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLILITFLAAKQGNILNIQPILG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
TPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMF
HCCCCHHCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH
KKINSNILYIIVFIFAAIIVNKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKSQLTHE
HHHHCCCC
>Mature Secondary Structure
MENKSNNVLTTNQTMLMIVGSMIGIGILSLPANLTKIAHNDGWIGVIIGSLYPFYMVLCA
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ILIFKDNSYHNTNIVEISKNYFGKILGSVFSFVFAFQYFIYTIITTANISNLLRVHLVLF
HHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQYKLAIPILLISVYAASKGIKSLGIINEIIFYAAIPLILITFLAAKQGNILNIQPILG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
TPISSILKASIETVYSFLGIEIIFLIVPLMEDKNKIRSSFLKSTLIVVVVYIWLSFISIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGPDVTKNLYWPTLSLAETIYVPGISNFKLVFIFLWNSIVFQTIANQSYFFYYSLSSMF
HCCCCHHCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH
KKINSNILYIIVFIFAAIIVNKLDSFITLTKINKYINVFYLTFNLIFITSITIIKIIKSR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKSQLTHE
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]