| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756352
Identifier: 170756352
GI number: 170756352
Start: 2815228
End: 2816427
Strand: Reverse
Name: 170756352
Synonym: CLD_1930
Alternate gene names: NA
Gene position: 2816427-2815228 (Counterclockwise)
Preceding gene: 170756347
Following gene: 170756214
Centisome position: 71.15
GC content: 28.75
Gene sequence:
>1200_bases ATGAAAAAAATTATTAAATCCCTTATGATTATATGTTTAATAGGGATTTTCAGCTTTATTATAACTAAGCATTATTATGA AAATAATAAAGTTAAGCTTTATAATGATAAACTTAATTGTGTTTTAAAATATAAGGGGTTAAAAGAAGCTAAAGATTTTG TTTTAGATAAGGAAGGGAATTTCTATATAGCTTTTAAAGATAAGATACAGTTCATAGATGTGAAAGGTAAAAGCTATGAC ATATTAAAGAAGGAAAACTTAAACATAACTAGTTTAGCCTATAGGGATAAACATTTATATTTTACTTCTAATAATGAACT TTATTCTTATGATATAGAAAAAAAGAAAGAAAAGGTTTTAATGAGTAATTTGCCTAATGTGGGAGATTACAATAAAAGTC TTATTTTAATAAATGATGATTATTTGTATTTAACTATTGGAGCTGCTACTAATTCAGCGGTGGTAGGTAAAGATAATAAA TGGTTTAGTAGCTCTCCTTTCTTTTGTGATGTATCCCCCTTCCCTCTTATAGTAAATGGTAAAAATTTTGGAAAGGAAGG TACAGGAGCTTTTAGCACTTATGGAACTAAGGCAGTAAGAGGTCAAAGGGTAACGCAGCACTTTCCAGGGAATTCTAGTG TTATAATATATAATTTAAAAAAAGAACGAATGGAAACTTATGCCTGGGGTATAAGAAATTTTAAGGGAATAGCTTTTAAT AGTAAGGGAAAGGTCCTAGCTTCTGTAGGTGGAATGGAATTTAGAGGGGAGAGGCCTGTAAAAGGAGACCGGGACTACAT TTATGAAATAAATAAGGGTACTTGGTATGGATGGCCTGATTATTCGGGAGGAGATCCTATAAATTCTCCTAGATTTAAGG GAAAGGGCAATAAACCTGTGGGTTTTGTTTTGGATAAACATCCTTCTACTAATCCACCAGCACCATTATATCAACATAAA GCATTAAATTCATTAGGAACTATTGCAGTAGATCATACTGGAGATATATTTTCAAAGGATTCCATAATATTTTATGAAAA GAATGAAAAAGCCTTATATTCTTTAGATGATTTAGGTATAATAAAAAAAGAAGTAGAATTTGAAAAAGCAAATATACAAA GTATAAAAATAATTAATGAAAATTTAATTGTATTAGACAACAATAAAGGATACTTATATATTATAAATAAAGGAAATTAA
Upstream 100 bases:
>100_bases TAATTTTCTTCTCTGGAACCATTGCATTTATAAATAGTCTTTATTTATATATGAAAAAATAATTGTAAAAAATAGGGGTA TCAATGATTTTGGAGGTACT
Downstream 100 bases:
>100_bases TTAAAAGAAAGAAGGTTCCTAATGATAAAAAAACTTGAAAAAACTTATGGAAGTGCTTTAAAAGGAGTATTTTTTGCAGT GAACCCTTTAAAAAAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glucose/Sorbosone Dehydrogenase-Like Protein; Glucose/Sorbosone Dehydrogenase
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKKIIKSLMIICLIGIFSFIITKHYYENNKVKLYNDKLNCVLKYKGLKEAKDFVLDKEGNFYIAFKDKIQFIDVKGKSYD ILKKENLNITSLAYRDKHLYFTSNNELYSYDIEKKKEKVLMSNLPNVGDYNKSLILINDDYLYLTIGAATNSAVVGKDNK WFSSSPFFCDVSPFPLIVNGKNFGKEGTGAFSTYGTKAVRGQRVTQHFPGNSSVIIYNLKKERMETYAWGIRNFKGIAFN SKGKVLASVGGMEFRGERPVKGDRDYIYEINKGTWYGWPDYSGGDPINSPRFKGKGNKPVGFVLDKHPSTNPPAPLYQHK ALNSLGTIAVDHTGDIFSKDSIIFYEKNEKALYSLDDLGIIKKEVEFEKANIQSIKIINENLIVLDNNKGYLYIINKGN
Sequences:
>Translated_399_residues MKKIIKSLMIICLIGIFSFIITKHYYENNKVKLYNDKLNCVLKYKGLKEAKDFVLDKEGNFYIAFKDKIQFIDVKGKSYD ILKKENLNITSLAYRDKHLYFTSNNELYSYDIEKKKEKVLMSNLPNVGDYNKSLILINDDYLYLTIGAATNSAVVGKDNK WFSSSPFFCDVSPFPLIVNGKNFGKEGTGAFSTYGTKAVRGQRVTQHFPGNSSVIIYNLKKERMETYAWGIRNFKGIAFN SKGKVLASVGGMEFRGERPVKGDRDYIYEINKGTWYGWPDYSGGDPINSPRFKGKGNKPVGFVLDKHPSTNPPAPLYQHK ALNSLGTIAVDHTGDIFSKDSIIFYEKNEKALYSLDDLGIIKKEVEFEKANIQSIKIINENLIVLDNNKGYLYIINKGN >Mature_399_residues MKKIIKSLMIICLIGIFSFIITKHYYENNKVKLYNDKLNCVLKYKGLKEAKDFVLDKEGNFYIAFKDKIQFIDVKGKSYD ILKKENLNITSLAYRDKHLYFTSNNELYSYDIEKKKEKVLMSNLPNVGDYNKSLILINDDYLYLTIGAATNSAVVGKDNK WFSSSPFFCDVSPFPLIVNGKNFGKEGTGAFSTYGTKAVRGQRVTQHFPGNSSVIIYNLKKERMETYAWGIRNFKGIAFN SKGKVLASVGGMEFRGERPVKGDRDYIYEINKGTWYGWPDYSGGDPINSPRFKGKGNKPVGFVLDKHPSTNPPAPLYQHK ALNSLGTIAVDHTGDIFSKDSIIFYEKNEKALYSLDDLGIIKKEVEFEKANIQSIKIINENLIVLDNNKGYLYIINKGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45368; Mature: 45368
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIKSLMIICLIGIFSFIITKHYYENNKVKLYNDKLNCVLKYKGLKEAKDFVLDKEGN CHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCEEEEEEECCCCHHHHHEEECCCC FYIAFKDKIQFIDVKGKSYDILKKENLNITSLAYRDKHLYFTSNNELYSYDIEKKKEKVL EEEEEECCEEEEEECCCCEEEEECCCCCEEEEEEECEEEEEECCCEEEEECCHHHHHHHH MSNLPNVGDYNKSLILINDDYLYLTIGAATNSAVVGKDNKWFSSSPFFCDVSPFPLIVNG HHCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEECCCCCCCCCCCEEECCCCEEEEEC KNFGKEGTGAFSTYGTKAVRGQRVTQHFPGNSSVIIYNLKKERMETYAWGIRNFKGIAFN CCCCCCCCCCCHHCCCHHHCCCCCEEECCCCCCEEEEECCHHHHHHHHHHCCCCEEEEEC SKGKVLASVGGMEFRGERPVKGDRDYIYEINKGTWYGWPDYSGGDPINSPRFKGKGNKPV CCCCEEEEECCEEECCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCE GFVLDKHPSTNPPAPLYQHKALNSLGTIAVDHTGDIFSKDSIIFYEKNEKALYSLDDLGI EEEEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCH IKKEVEFEKANIQSIKIINENLIVLDNNKGYLYIINKGN HHHHCEEECCCCEEEEEECCCEEEEECCCCEEEEEECCC >Mature Secondary Structure MKKIIKSLMIICLIGIFSFIITKHYYENNKVKLYNDKLNCVLKYKGLKEAKDFVLDKEGN CHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCEEEEEEECCCCHHHHHEEECCCC FYIAFKDKIQFIDVKGKSYDILKKENLNITSLAYRDKHLYFTSNNELYSYDIEKKKEKVL EEEEEECCEEEEEECCCCEEEEECCCCCEEEEEEECEEEEEECCCEEEEECCHHHHHHHH MSNLPNVGDYNKSLILINDDYLYLTIGAATNSAVVGKDNKWFSSSPFFCDVSPFPLIVNG HHCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEECCCCCCCCCCCEEECCCCEEEEEC KNFGKEGTGAFSTYGTKAVRGQRVTQHFPGNSSVIIYNLKKERMETYAWGIRNFKGIAFN CCCCCCCCCCCHHCCCHHHCCCCCEEECCCCCCEEEEECCHHHHHHHHHHCCCCEEEEEC SKGKVLASVGGMEFRGERPVKGDRDYIYEINKGTWYGWPDYSGGDPINSPRFKGKGNKPV CCCCEEEEECCEEECCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCE GFVLDKHPSTNPPAPLYQHKALNSLGTIAVDHTGDIFSKDSIIFYEKNEKALYSLDDLGI EEEEECCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCH IKKEVEFEKANIQSIKIINENLIVLDNNKGYLYIINKGN HHHHCEEECCCCEEEEEECCCEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA