| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756346
Identifier: 170756346
GI number: 170756346
Start: 3242229
End: 3242942
Strand: Reverse
Name: 170756346
Synonym: CLD_1553
Alternate gene names: NA
Gene position: 3242942-3242229 (Counterclockwise)
Preceding gene: 170757710
Following gene: 170754795
Centisome position: 81.93
GC content: 25.35
Gene sequence:
>714_bases TTGAAGGTGCGATATCTAATTAAATTTTCAAAGGAAGGTAATATAAAATTTGTATCTCATTTAGACCTTCAAAGAACTCT ACAAAGAAATTTTAAAAGAAGTGGATTACCTGTAGAGTATTCAAAAGGTTTTAATCCTCATATAATTATGTCTTTAGCTC AACCTTTAGCAGTAGGACTTTACTCTAAAGGAGAGTATTTAGATGTATCTTTTATAGAAGAAGAAGATGAGAAAATAATT GTAGATAAATTAAATAGTACTGCTCCTTCAGGTATAAAATATTTTAAAGCTGTAAAATTAAAAGAGGGTACAAATAAAAA AGTATTCAAGTCTATGGCAGCAGTAGCAGCAGCAAAATATATAATACAAATAAAATATAAAAATACGGAAAATTTAGAAG ATGAGTTAAAAACATTATTAAATATGGATAATTGGGATATAATCAAAAAAGGCAAAAAGGGAAGCAAAAATGTAAATATA AAACCTATGATTAAAAATATAGATTATTCTATAGAAAGTAATTTATTAAAAATAAATGTTTTAGTAAGTTGTGGAAGTAT TCAAAATCTTTCTGCAGATCTTTTAGCCCAATTTATAAAGGAAAATACATCTGACACAAAAGAAAATAGTTTTGTAGATA TAGAAAGACAAGAAATATATGGAGAATACAAAAATAAATTAGTAGCTCTTTCTGATTACGCTATGTATGTATAA
Upstream 100 bases:
>100_bases ATGAGAGAAAATGAAAGAGCTAAAAAGGCAGAAGTAACTCCAGATTGTAGACAGGGATGTAAGAATTGCGGAGTAAATGT TAATTTAGAAGGAGAGTGTT
Downstream 100 bases:
>100_bases ACAGAGTTCTTAGCTTCAGAGGGATTTTTTACTCCATCTAAAGCCTAGAAATCGTTATCCAGGGGCGTAATCGCTCTTTG CTCCCACTTTAAAGAAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKVRYLIKFSKEGNIKFVSHLDLQRTLQRNFKRSGLPVEYSKGFNPHIIMSLAQPLAVGLYSKGEYLDVSFIEEEDEKII VDKLNSTAPSGIKYFKAVKLKEGTNKKVFKSMAAVAAAKYIIQIKYKNTENLEDELKTLLNMDNWDIIKKGKKGSKNVNI KPMIKNIDYSIESNLLKINVLVSCGSIQNLSADLLAQFIKENTSDTKENSFVDIERQEIYGEYKNKLVALSDYAMYV
Sequences:
>Translated_237_residues MKVRYLIKFSKEGNIKFVSHLDLQRTLQRNFKRSGLPVEYSKGFNPHIIMSLAQPLAVGLYSKGEYLDVSFIEEEDEKII VDKLNSTAPSGIKYFKAVKLKEGTNKKVFKSMAAVAAAKYIIQIKYKNTENLEDELKTLLNMDNWDIIKKGKKGSKNVNI KPMIKNIDYSIESNLLKINVLVSCGSIQNLSADLLAQFIKENTSDTKENSFVDIERQEIYGEYKNKLVALSDYAMYV >Mature_237_residues MKVRYLIKFSKEGNIKFVSHLDLQRTLQRNFKRSGLPVEYSKGFNPHIIMSLAQPLAVGLYSKGEYLDVSFIEEEDEKII VDKLNSTAPSGIKYFKAVKLKEGTNKKVFKSMAAVAAAKYIIQIKYKNTENLEDELKTLLNMDNWDIIKKGKKGSKNVNI KPMIKNIDYSIESNLLKINVLVSCGSIQNLSADLLAQFIKENTSDTKENSFVDIERQEIYGEYKNKLVALSDYAMYV
Specific function: Unknown
COG id: COG5011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27040; Mature: 27040
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRYLIKFSKEGNIKFVSHLDLQRTLQRNFKRSGLPVEYSKGFNPHIIMSLAQPLAVGL CCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHC YSKGEYLDVSFIEEEDEKIIVDKLNSTAPSGIKYFKAVKLKEGTNKKVFKSMAAVAAAKY CCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHEEE IIQIKYKNTENLEDELKTLLNMDNWDIIKKGKKGSKNVNIKPMIKNIDYSIESNLLKINV EEEEEECCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEHCCCCCCCCCCEEEEEE LVSCGSIQNLSADLLAQFIKENTSDTKENSFVDIERQEIYGEYKNKLVALSDYAMYV EEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCEEEEECEEECC >Mature Secondary Structure MKVRYLIKFSKEGNIKFVSHLDLQRTLQRNFKRSGLPVEYSKGFNPHIIMSLAQPLAVGL CCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHC YSKGEYLDVSFIEEEDEKIIVDKLNSTAPSGIKYFKAVKLKEGTNKKVFKSMAAVAAAKY CCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHEEE IIQIKYKNTENLEDELKTLLNMDNWDIIKKGKKGSKNVNIKPMIKNIDYSIESNLLKINV EEEEEECCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEHCCCCCCCCCCEEEEEE LVSCGSIQNLSADLLAQFIKENTSDTKENSFVDIERQEIYGEYKNKLVALSDYAMYV EEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCEEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA