Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170756337

Identifier: 170756337

GI number: 170756337

Start: 825602

End: 826144

Strand: Direct

Name: 170756337

Synonym: CLD_0063

Alternate gene names: NA

Gene position: 825602-826144 (Clockwise)

Preceding gene: 170754232

Following gene: 170754995

Centisome position: 20.86

GC content: 43.83

Gene sequence:

>543_bases
ATGCAGATGAACACAAGTGATATTTTATCAATGCCAAATAATCTCATGGCTCCAGAAGGAGTAGCGGCTTTTTTTGCAAT
TGCCTGCGTAACGGCTGGATTTGCAGCTCTTTTGTATACTTTGTTCCGGCTTATAAAAAACCGGGACACGATACCCCTTA
TGATTTGGTTGGGCGGCTTACTTGCATTTACAGTGGAGGCATTTGGGGATTGTGTAGGACATATTTGGTGGCCACATAAT
CTTCCAGGGCCTGTGCTATGGTTTTTTGACGTGAGACTGCCGCTCTTTATCATGATTGAATATACAGCCTTTGCTGTGGT
CAGTTATGGTGCCTATAGGATGTTTAAAAATGGCATTACAAAGAAGCAGCTTTGGGGCGTATGGATTATCCTGATGAGCG
CCGACATTCTTTTTGAGATGCCGTTTACAAGCCATGCCGCTTTCGTGTATTATGGATTTACACCATTTCAGATTTTTGGC
TTTCCCGCTTGGTGGGGCTGGATCAATGGCACTGCTTTCATCCTGATCGGTTTTATCCTATAG

Upstream 100 bases:

>100_bases
CATCATGAATAAAACTATTGACGGTATAAAAAAATCGTGATACAACTTGATTAATTCGGACGACCGTATTATATTAAATA
AATAAAAAAAGAGATTTAAT

Downstream 100 bases:

>100_bases
CTAGTGGAGCCTATCTTAAGAGGTTGGCGCAGGCTTTTCATTCTATTTATACCACTAACCAGCATTGCGCTTTCATATGG
TGCATTTGCACAGCCAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MQMNTSDILSMPNNLMAPEGVAAFFAIACVTAGFAALLYTLFRLIKNRDTIPLMIWLGGLLAFTVEAFGDCVGHIWWPHN
LPGPVLWFFDVRLPLFIMIEYTAFAVVSYGAYRMFKNGITKKQLWGVWIILMSADILFEMPFTSHAAFVYYGFTPFQIFG
FPAWWGWINGTAFILIGFIL

Sequences:

>Translated_180_residues
MQMNTSDILSMPNNLMAPEGVAAFFAIACVTAGFAALLYTLFRLIKNRDTIPLMIWLGGLLAFTVEAFGDCVGHIWWPHN
LPGPVLWFFDVRLPLFIMIEYTAFAVVSYGAYRMFKNGITKKQLWGVWIILMSADILFEMPFTSHAAFVYYGFTPFQIFG
FPAWWGWINGTAFILIGFIL
>Mature_180_residues
MQMNTSDILSMPNNLMAPEGVAAFFAIACVTAGFAALLYTLFRLIKNRDTIPLMIWLGGLLAFTVEAFGDCVGHIWWPHN
LPGPVLWFFDVRLPLFIMIEYTAFAVVSYGAYRMFKNGITKKQLWGVWIILMSADILFEMPFTSHAAFVYYGFTPFQIFG
FPAWWGWINGTAFILIGFIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20446; Mature: 20446

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMNTSDILSMPNNLMAPEGVAAFFAIACVTAGFAALLYTLFRLIKNRDTIPLMIWLGGL
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LAFTVEAFGDCVGHIWWPHNLPGPVLWFFDVRLPLFIMIEYTAFAVVSYGAYRMFKNGIT
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
KKQLWGVWIILMSADILFEMPFTSHAAFVYYGFTPFQIFGFPAWWGWINGTAFILIGFIL
HHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCHHHEECCCHHHHHHCCHHHHHHHHHC
>Mature Secondary Structure
MQMNTSDILSMPNNLMAPEGVAAFFAIACVTAGFAALLYTLFRLIKNRDTIPLMIWLGGL
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LAFTVEAFGDCVGHIWWPHNLPGPVLWFFDVRLPLFIMIEYTAFAVVSYGAYRMFKNGIT
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
KKQLWGVWIILMSADILFEMPFTSHAAFVYYGFTPFQIFGFPAWWGWINGTAFILIGFIL
HHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCHHHEECCCHHHHHHCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA