| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756328
Identifier: 170756328
GI number: 170756328
Start: 3169038
End: 3169781
Strand: Reverse
Name: 170756328
Synonym: CLD_1622
Alternate gene names: NA
Gene position: 3169781-3169038 (Counterclockwise)
Preceding gene: 170755791
Following gene: 170757609
Centisome position: 80.08
GC content: 30.51
Gene sequence:
>744_bases ATGATTAGAAAGATAGTTAATATAGATAAAGAAAAATGTAATGGATGTGGATTATGTGTGACAGCTTGTCATGAAGGAGC TATAGAGCTAATAGATGGCAGGGCAGTTTTAATTAGTGATGAATATTGTGATGGATTAGGAGATTGTCTTCCAGAATGTC CAACAGGAGCTATAAAAATAGTGGAAAGAGAAGCGGCAGAATATAATGAAGAATTAGTAGAAAAAAGAATGGCCATGAAA AAGCCAGTAGAAGAAAACAAAGAAAAAATGCCTTGTGGATGTCCAGGAACTATGGCAAAAGCTATTAAGAGAACGGGAAA AAATGCTAATTTAAGGATAGAAGACAAAGATAATAAAAACAATGAAAAAATAAATATTGATTCAGAATTACAACAATGGC CTGTACAAATAAAATTAGTTAATACAAAAGCTCCATACCTACAAGACGTAAATTTATTAATAGCAGGAGACTGTACTGCA TATGCTTATGGTGATTTTCATAAAAAATTTATAAAAGATCGTATAACGCTAATAGGGTGTCCTAAACTAGATGATAATGA ATACTATAAAGAAAAAATAGCAGAAATATTAAAAAACAACAACATAAAAAGTATAACTGTAGTAAGAATGGAAGTACCTT GCTGTGGTGGTATAGTAAATGCAGTTAAGGGAGCCATGTTAAAATCAGAAACTATAGTACCATTTAATGAAGTAATAATA AGTACAGATGGAAGAATAAAATAA
Upstream 100 bases:
>100_bases ATACCCCCCCATAAATTTTATGATGGTAACATTAGTTACAGAATTATTTACATAATAGTACTATAATAAATGTATAAAAT CAACAGGGAGGAATATAAAA
Downstream 100 bases:
>100_bases AGAAATTACGACTTAAAAGTAAGTTATACTACCCTTGGTTTAAAAAAGGGATATGTGGTTAGAAAGGCAACTCACTTCAA TAAGAGATTCTAACTTGTTT
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MIRKIVNIDKEKCNGCGLCVTACHEGAIELIDGRAVLISDEYCDGLGDCLPECPTGAIKIVEREAAEYNEELVEKRMAMK KPVEENKEKMPCGCPGTMAKAIKRTGKNANLRIEDKDNKNNEKINIDSELQQWPVQIKLVNTKAPYLQDVNLLIAGDCTA YAYGDFHKKFIKDRITLIGCPKLDDNEYYKEKIAEILKNNNIKSITVVRMEVPCCGGIVNAVKGAMLKSETIVPFNEVII STDGRIK
Sequences:
>Translated_247_residues MIRKIVNIDKEKCNGCGLCVTACHEGAIELIDGRAVLISDEYCDGLGDCLPECPTGAIKIVEREAAEYNEELVEKRMAMK KPVEENKEKMPCGCPGTMAKAIKRTGKNANLRIEDKDNKNNEKINIDSELQQWPVQIKLVNTKAPYLQDVNLLIAGDCTA YAYGDFHKKFIKDRITLIGCPKLDDNEYYKEKIAEILKNNNIKSITVVRMEVPCCGGIVNAVKGAMLKSETIVPFNEVII STDGRIK >Mature_247_residues MIRKIVNIDKEKCNGCGLCVTACHEGAIELIDGRAVLISDEYCDGLGDCLPECPTGAIKIVEREAAEYNEELVEKRMAMK KPVEENKEKMPCGCPGTMAKAIKRTGKNANLRIEDKDNKNNEKINIDSELQQWPVQIKLVNTKAPYLQDVNLLIAGDCTA YAYGDFHKKFIKDRITLIGCPKLDDNEYYKEKIAEILKNNNIKSITVVRMEVPCCGGIVNAVKGAMLKSETIVPFNEVII STDGRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27513; Mature: 27513
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKIVNIDKEKCNGCGLCVTACHEGAIELIDGRAVLISDEYCDGLGDCLPECPTGAIKI CCCCHHCCCHHHCCCCCEEEEECCCCCEEEECCCEEEEECHHHHHHHHHCCCCCCCCEEH VEREAAEYNEELVEKRMAMKKPVEENKEKMPCGCPGTMAKAIKRTGKNANLRIEDKDNKN HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC NEKINIDSELQQWPVQIKLVNTKAPYLQDVNLLIAGDCTAYAYGDFHKKFIKDRITLIGC CCEEEECCHHHHCCEEEEEEECCCCCEECCCEEEECCCEEEEHHHHHHHHHHCCEEEEEC PKLDDNEYYKEKIAEILKNNNIKSITVVRMEVPCCGGIVNAVKGAMLKSETIVPFNEVII CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHEEE STDGRIK ECCCCCC >Mature Secondary Structure MIRKIVNIDKEKCNGCGLCVTACHEGAIELIDGRAVLISDEYCDGLGDCLPECPTGAIKI CCCCHHCCCHHHCCCCCEEEEECCCCCEEEECCCEEEEECHHHHHHHHHCCCCCCCCEEH VEREAAEYNEELVEKRMAMKKPVEENKEKMPCGCPGTMAKAIKRTGKNANLRIEDKDNKN HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC NEKINIDSELQQWPVQIKLVNTKAPYLQDVNLLIAGDCTAYAYGDFHKKFIKDRITLIGC CCEEEECCHHHHCCEEEEEEECCCCCEECCCEEEECCCEEEEHHHHHHHHHHCCEEEEEC PKLDDNEYYKEKIAEILKNNNIKSITVVRMEVPCCGGIVNAVKGAMLKSETIVPFNEVII CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHEEE STDGRIK ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]