| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170756307
Identifier: 170756307
GI number: 170756307
Start: 84572
End: 85075
Strand: Direct
Name: 170756307
Synonym: CLD_0735
Alternate gene names: NA
Gene position: 84572-85075 (Clockwise)
Preceding gene: 170755003
Following gene: 170757094
Centisome position: 2.14
GC content: 20.83
Gene sequence:
>504_bases ATGGGAAATATGTATAAAGAAACTGTGGCTAGAAGAACAGTTCCAGTTTTATTTTTTATGCTTATTTTATTAGTAGGAAT TTTATTTTTAGTGGAATTTTTAAAAAGTATTAAATTTTATGGTTATAAATTAGATGAAATTTTAAATATCTTTTTATTAT CTATAGTTATATTAGTAAGCTTTTTAGAAGTATTTAGATTTAAGATAAAATATTCATATTTTATAATAGCAGATCAGTTT ATAATTCATAAGATAAAAGGAAATTATGATAAAGTAGTAGAAAATATAAAGTTAAAAGATATAATTTATTTTGATAAATG TGCTGGATTAAGATCAAAAATAGACATGAGTAAATCTAAAAAATATACATGTTCTTTATTAGATAGAGATACTTATTGCT GTGTCTATAAAGATGGGAATAGTACTAAGAAATTTTATTTTGAACCTAGCAATAATTTAATTACAAAAATAAAATACTTA TCAAATAAGAGGCTAGCTAGCTAG
Upstream 100 bases:
>100_bases AGGGTTAATATTGCGGTGGATTAATGCTTAAAAGCTTAGTATAATCTTCATCGTAAAGGAATTTTAAAATTATTTTATAT TATTTTGGAGGGTTTATAAA
Downstream 100 bases:
>100_bases TCTCTTATTCTATTTTATTAAAAAATTCTTTTTTTACTTCTTTTAGAAGCATATCATTTTGAATTAGATCTAATGCAGTT AAACTTAAGGCTTGAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MGNMYKETVARRTVPVLFFMLILLVGILFLVEFLKSIKFYGYKLDEILNIFLLSIVILVSFLEVFRFKIKYSYFIIADQF IIHKIKGNYDKVVENIKLKDIIYFDKCAGLRSKIDMSKSKKYTCSLLDRDTYCCVYKDGNSTKKFYFEPSNNLITKIKYL SNKRLAS
Sequences:
>Translated_167_residues MGNMYKETVARRTVPVLFFMLILLVGILFLVEFLKSIKFYGYKLDEILNIFLLSIVILVSFLEVFRFKIKYSYFIIADQF IIHKIKGNYDKVVENIKLKDIIYFDKCAGLRSKIDMSKSKKYTCSLLDRDTYCCVYKDGNSTKKFYFEPSNNLITKIKYL SNKRLAS >Mature_166_residues GNMYKETVARRTVPVLFFMLILLVGILFLVEFLKSIKFYGYKLDEILNIFLLSIVILVSFLEVFRFKIKYSYFIIADQFI IHKIKGNYDKVVENIKLKDIIYFDKCAGLRSKIDMSKSKKYTCSLLDRDTYCCVYKDGNSTKKFYFEPSNNLITKIKYLS NKRLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19696; Mature: 19565
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNMYKETVARRTVPVLFFMLILLVGILFLVEFLKSIKFYGYKLDEILNIFLLSIVILVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FLEVFRFKIKYSYFIIADQFIIHKIKGNYDKVVENIKLKDIIYFDKCAGLRSKIDMSKSK HHHHHHHHHHHEEEEEEHHHHHHHHCCCHHHHHHCCCHHHHEEHHHHCCHHHHHCCCCCC KYTCSLLDRDTYCCVYKDGNSTKKFYFEPSNNLITKIKYLSNKRLAS CCEEEEECCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure GNMYKETVARRTVPVLFFMLILLVGILFLVEFLKSIKFYGYKLDEILNIFLLSIVILVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FLEVFRFKIKYSYFIIADQFIIHKIKGNYDKVVENIKLKDIIYFDKCAGLRSKIDMSKSK HHHHHHHHHHHEEEEEEHHHHHHHHCCCHHHHHHCCCHHHHEEHHHHCCHHHHHCCCCCC KYTCSLLDRDTYCCVYKDGNSTKKFYFEPSNNLITKIKYLSNKRLAS CCEEEEECCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA