| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is cbiG
Identifier: 170756287
GI number: 170756287
Start: 1060752
End: 1061846
Strand: Direct
Name: cbiG
Synonym: CLD_3612
Alternate gene names: 170756287
Gene position: 1060752-1061846 (Clockwise)
Preceding gene: 170755796
Following gene: 170756868
Centisome position: 26.8
GC content: 26.12
Gene sequence:
>1095_bases ATGAAAATATCTATAATTAATGTAACCAAAATGGGTAATGATATAGCCTATAAAATTAAAGAACATATGGATGCAGATTT ATATTCAAAATATGTTACAAAAGAGTTAATAGCGGAAGCTAGCTTGGAATATAAACATTCACATTGTAAAGATAGTAATT TAAATTTATTAAATGACAAACATTATTTTAAAAAAGAAGATTTTAATTTTAAAGAAATAGTAAAAAAATCTTTTCAAGAT TATGATGCAATAATATTTATAAGTTCTACCGGTATAGCAGTAAGAGCTATTGCACCTTTTATACAAAGCAAAGATAAGGA TTCAGCAGTTATTGTAATAGATAGTACAGGTAGATATGTCATAAGCCTTTTAAGTGGACATCTAGGTGGAGCCAATGAAT TAACAGAAAAAATAGCTAAAACTATAGGTGCAGAACCTATAATAACCACAGCCACGGATAATTTAAATATAAAAGCTCCA GACATTATAGCTAAAGAGAATAATTTAGTAATAGAGGATTTGAAAAAAGCAAAGGATATAGCTGCATTACTTGTAAATGG AGAAAAAGTGGCCTTCATAGATGAAGATAGGTTAGTGAATTTTCCTAAAGGCTATACTTATGATATAGAAGATGCTAAAG GATTAGTTTTTGTAACAAATAAATTATATATAGATGAAGATTTAAAAAATGAAAAATTAAATAAAAAGTGTATTTTAAAA TTAATAAGAAAAAATATAGTTTTAGGTATCGGTTGTAGAAAAAATTATGATGATATAACTATGAAAGAAAATGTAATAAA GGTTTTAAAAGAAGAAAATATAGATTTAAAAAGCATAAATTCTATAGTTTCCGTGGAAATAAAAAAAGATGAGAATGCAA TAAAGGAGCTTTCAAAATTTTTAGGATGCCCCTTTATAACTTATAGCATAGAAGAAATAAAAAAAGTAGAACATAAATTT AAAGGTAGTGATTTTGTAAGAAAAACTATAGGAGTAAGGTCAGTGTGTGAGCCATCTATAGAATTAAAAGGCGGGAAAAT AATTAAAGAAAAACAAAAACTAACGGGGATGACTTTGGCAATTGGAAAACTATAA
Upstream 100 bases:
>100_bases GCTCAAATATTAGTAGGGGATTTTATAGATTGTAAATATGACAAAAGCCTACTATACGATGAAAAATTTACTCATGAGTT TAGAAAAGGAATCTAGGATA
Downstream 100 bases:
>100_bases GTTTAAAAGTCTTCTCATAAATAAAAATTTTTAAAAATTGTGAAGGTTAAGTAACCTATAAAAATCAAATGGTGATTTTA AATCAATGAAGAGCAGGACA
Product: cobalamin biosynthesis protein CbiG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKDSNLNLLNDKHYFKKEDFNFKEIVKKSFQD YDAIIFISSTGIAVRAIAPFIQSKDKDSAVIVIDSTGRYVISLLSGHLGGANELTEKIAKTIGAEPIITTATDNLNIKAP DIIAKENNLVIEDLKKAKDIAALLVNGEKVAFIDEDRLVNFPKGYTYDIEDAKGLVFVTNKLYIDEDLKNEKLNKKCILK LIRKNIVLGIGCRKNYDDITMKENVIKVLKEENIDLKSINSIVSVEIKKDENAIKELSKFLGCPFITYSIEEIKKVEHKF KGSDFVRKTIGVRSVCEPSIELKGGKIIKEKQKLTGMTLAIGKL
Sequences:
>Translated_364_residues MKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKDSNLNLLNDKHYFKKEDFNFKEIVKKSFQD YDAIIFISSTGIAVRAIAPFIQSKDKDSAVIVIDSTGRYVISLLSGHLGGANELTEKIAKTIGAEPIITTATDNLNIKAP DIIAKENNLVIEDLKKAKDIAALLVNGEKVAFIDEDRLVNFPKGYTYDIEDAKGLVFVTNKLYIDEDLKNEKLNKKCILK LIRKNIVLGIGCRKNYDDITMKENVIKVLKEENIDLKSINSIVSVEIKKDENAIKELSKFLGCPFITYSIEEIKKVEHKF KGSDFVRKTIGVRSVCEPSIELKGGKIIKEKQKLTGMTLAIGKL >Mature_364_residues MKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKDSNLNLLNDKHYFKKEDFNFKEIVKKSFQD YDAIIFISSTGIAVRAIAPFIQSKDKDSAVIVIDSTGRYVISLLSGHLGGANELTEKIAKTIGAEPIITTATDNLNIKAP DIIAKENNLVIEDLKKAKDIAALLVNGEKVAFIDEDRLVNFPKGYTYDIEDAKGLVFVTNKLYIDEDLKNEKLNKKCILK LIRKNIVLGIGCRKNYDDITMKENVIKVLKEENIDLKSINSIVSVEIKKDENAIKELSKFLGCPFITYSIEEIKKVEHKF KGSDFVRKTIGVRSVCEPSIELKGGKIIKEKQKLTGMTLAIGKL
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021745 - InterPro: IPR021744 - InterPro: IPR002750 [H]
Pfam domain/function: PF01890 CbiG; PF11761 CbiG_mid; PF11760 CbiG_N [H]
EC number: NA
Molecular weight: Translated: 40957; Mature: 40957
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKDSNLNLLNDK CEEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCC HYFKKEDFNFKEIVKKSFQDYDAIIFISSTGIAVRAIAPFIQSKDKDSAVIVIDSTGRYV CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEHHHHHHHHHCCCCCCEEEEEECCCHHH ISLLSGHLGGANELTEKIAKTIGAEPIITTATDNLNIKAPDIIAKENNLVIEDLKKAKDI HHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEECCCEEECCCCCHHHHHHHHHHH AALLVNGEKVAFIDEDRLVNFPKGYTYDIEDAKGLVFVTNKLYIDEDLKNEKLNKKCILK EEEEECCCEEEEEECCCEEECCCCCEEECCCCCCEEEEEEEEEECCCCCCCCCCHHHHHH LIRKNIVLGIGCRKNYDDITMKENVIKVLKEENIDLKSINSIVSVEIKKDENAIKELSKF HHHHHCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCHHHHHHHHHH LGCPFITYSIEEIKKVEHKFKGSDFVRKTIGVRSVCEPSIELKGGKIIKEKQKLTGMTLA HCCCEEEECHHHHHHHHHHHCCCHHHHHHHCHHHHCCCCCEECCCEEEHHHHHHCCEEEE IGKL ECCC >Mature Secondary Structure MKISIINVTKMGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKDSNLNLLNDK CEEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCC HYFKKEDFNFKEIVKKSFQDYDAIIFISSTGIAVRAIAPFIQSKDKDSAVIVIDSTGRYV CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEHHHHHHHHHCCCCCCEEEEEECCCHHH ISLLSGHLGGANELTEKIAKTIGAEPIITTATDNLNIKAPDIIAKENNLVIEDLKKAKDI HHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEECCCEEECCCCCHHHHHHHHHHH AALLVNGEKVAFIDEDRLVNFPKGYTYDIEDAKGLVFVTNKLYIDEDLKNEKLNKKCILK EEEEECCCEEEEEECCCEEECCCCCEEECCCCCCEEEEEEEEEECCCCCCCCCCHHHHHH LIRKNIVLGIGCRKNYDDITMKENVIKVLKEENIDLKSINSIVSVEIKKDENAIKELSKF HHHHHCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCHHHHHHHHHH LGCPFITYSIEEIKKVEHKFKGSDFVRKTIGVRSVCEPSIELKGGKIIKEKQKLTGMTLA HCCCEEEECHHHHHHHHHHHCCCHHHHHHHCHHHHCCCCCEECCCEEEHHHHHHCCEEEE IGKL ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]