| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is fusA
Identifier: 170756221
GI number: 170756221
Start: 3780198
End: 3782267
Strand: Reverse
Name: fusA
Synonym: CLD_1021
Alternate gene names: 170756221
Gene position: 3782267-3780198 (Counterclockwise)
Preceding gene: 170755397
Following gene: 170755852
Centisome position: 95.55
GC content: 34.78
Gene sequence:
>2070_bases TTGGCGAACAAAGAATATCCATTGGCAAAATTTCGTAATATCGGGATTATGGCTCATATAGATGCGGGAAAAACTACAGC AACAGAACGTATATTATTCTATACAGGAAAAACTCATAAAATAGGTGAAACTCATGAGGGTGCAGCTACAATGGACTGGA TGGAACAAGAACAAGAAAGAGGCATAACAATTACATCTGCAGCAACAACTTGTTTTTGGAAAGACCATCAAGTAAATATA ATAGATACACCAGGACACGTAGATTTTACAGTTGAAGTTGAAAGATCTTTAAGAGTATTAGATGGTGCAGTAACAATATT AGATGCTAAAAGTGGTGTTGAACCACAAACGGAAACAGTGTGGAGACAGGCAGACAATTATAAGGTACCAAGAATGGTAT TTATAAATAAAATGGATAAATTAGGGGCAGACTTTTTAATGTCTGTAGGAACACTAAGAGAAAGATTACATGCAAATGCA GTGCCACTTCAATTACCAATAGGTGCAGAAGATTCATTTTCAGGAATTATAGATCTTGTAAAAAATGATGCTATTATTTA CAAAGATGATTTAGGGACTGTAATGGATGAAACAGAAATTCCAGAAGATATGAAAGAAATGGCTGAAGAATACAGAACAA TGTTATTAGAAGCTGTTGCAGAAGTAGATGAAGACATAATGATGAAATACTTAGAAGGTGAAGAGATTTCTGTAGAAGAA ATAAAAACAGCCTTAAGAAAAGGTGTTTTAGCAAACAAAATAGTTCCAGTTCTTTGTGGATCAGCTTACAAAAATAAAGG TGTTCAATTATTACTAGATGCTATAATTGAATTCATGCCTTCACCATTAGATATAGAAGACGTTAAAGGAACAGAACCTA CAACAGGTGAAGAAATGACAAGGCCAGCAGATGCAAAAGCTCCATTAGCGGCATTAGCATTTAAAATAGCCACAGATCCA TTCATTGGTAAGTTAGCATTTACTAGAATTTACTCTGGTACAATGAAGAGCGGTACGTATGTATTTAACTCTAACAAAGG CAAGAGAGAGAGAATAGGAAGATTGGTTAAAATGCATGCTAACCACAGAGAAGATGTTGAAGAATTAAAGGCCGGGGAAT TAGGAGCTATAGTTGGTCTTAAAGATACAACTACAGGAGATACACTTTGTGATGATGCAGACCCAATTATACTTGAAAAC ATGGAATTCCCAGAACCAGTTATAGATGTATCAATAGAACCAAAAACAAAAGCTGGTCAAGAAAAGATGGGAATAGCTTT AGCAAAATTAGCAGAAGAAGATCCAACATTTAGAACATATACAAACCAAGAAACAGGTCAAACAATTATAGCTGGTATGG GAGAACTTCATCTTGAAATAATTGTTGATAGACTTATAAGGGAATTTAAAGTTGAATGTAATGTAGGTCAACCACAAGTT GCTTATAAAGAAACTATCAAAAAGCATGTTAAAGCTGAAGGTAAGTTTATAAGACAATCAGGTGGACGTGGACAATACGG ACATTGTTGGATTGAAATGATGCCAACTGAAGGAGAATATGAATTCCAAAATGCTGTTGTTGGTGGATCAATACCAAAAG AATACATTCCAGCAATTGACAATGGTATTCAAGAAGCTTCACAAAGCGGTATAATTGCAGGATATCCTGTTATTAACTTT AAAGTTAAATTGTTTGATGGATCATACCATGATGTTGACTCATCAGAAATGGCCTTCAAGATTGCAGGTTCTATGGCCTT TAAAAATGCGATGTCAAAAGCAGATGCTGTGTTATTAGAACCTTCAATGAAAGTTGAAGTAGTTGTACCAGAAGAATATA TGGGTGATGTAATAGGTGACATCAACTCAAGAAGAGGTAGAATAGAAGGAATGACTCCAAGAGCAGGTGCAGAAGTAATA AGAGCCTTCGTACCACTTTCAGAAATGTTTGGATATGCTACTACATTAAGATCTAAAACTCAAGGTAGAGGAAATTATGT AATGCAATTTGATCATTATGAAGAAGTTCCAAAGAGCATTCAAGATAAAGTAATTGGAGAAAGAAAATAA
Upstream 100 bases:
>100_bases ACAAAGCTTTCGCACATTACAGATACTAATACAAAACTGTTTTGGCTGTGCCAAAACAGTTTTGTCAAATTTGAATTTGA AACGATGGGAGGAAAAGCAA
Downstream 100 bases:
>100_bases TATTATAATTATATAAGCACAAAAAAGGAGGAAATAAAAATGGCAAAAGCAAAATTTGAAAGAAGTAAACCTCATGTAAA CATAGGAACAATAGGTCACG
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGAATMDWMEQEQERGITITSAATTCFWKDHQVNI IDTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETVWRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANA VPLQLPIGAEDSFSGIIDLVKNDAIIYKDDLGTVMDETEIPEDMKEMAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEE IKTALRKGVLANKIVPVLCGSAYKNKGVQLLLDAIIEFMPSPLDIEDVKGTEPTTGEEMTRPADAKAPLAALAFKIATDP FIGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHANHREDVEELKAGELGAIVGLKDTTTGDTLCDDADPIILEN MEFPEPVIDVSIEPKTKAGQEKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQV AYKETIKKHVKAEGKFIRQSGGRGQYGHCWIEMMPTEGEYEFQNAVVGGSIPKEYIPAIDNGIQEASQSGIIAGYPVINF KVKLFDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLEPSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVI RAFVPLSEMFGYATTLRSKTQGRGNYVMQFDHYEEVPKSIQDKVIGERK
Sequences:
>Translated_689_residues MANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGAATMDWMEQEQERGITITSAATTCFWKDHQVNI IDTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETVWRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANA VPLQLPIGAEDSFSGIIDLVKNDAIIYKDDLGTVMDETEIPEDMKEMAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEE IKTALRKGVLANKIVPVLCGSAYKNKGVQLLLDAIIEFMPSPLDIEDVKGTEPTTGEEMTRPADAKAPLAALAFKIATDP FIGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHANHREDVEELKAGELGAIVGLKDTTTGDTLCDDADPIILEN MEFPEPVIDVSIEPKTKAGQEKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQV AYKETIKKHVKAEGKFIRQSGGRGQYGHCWIEMMPTEGEYEFQNAVVGGSIPKEYIPAIDNGIQEASQSGIIAGYPVINF KVKLFDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLEPSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVI RAFVPLSEMFGYATTLRSKTQGRGNYVMQFDHYEEVPKSIQDKVIGERK >Mature_688_residues ANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGAATMDWMEQEQERGITITSAATTCFWKDHQVNII DTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETVWRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANAV PLQLPIGAEDSFSGIIDLVKNDAIIYKDDLGTVMDETEIPEDMKEMAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEEI KTALRKGVLANKIVPVLCGSAYKNKGVQLLLDAIIEFMPSPLDIEDVKGTEPTTGEEMTRPADAKAPLAALAFKIATDPF IGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHANHREDVEELKAGELGAIVGLKDTTTGDTLCDDADPIILENM EFPEPVIDVSIEPKTKAGQEKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQVA YKETIKKHVKAEGKFIRQSGGRGQYGHCWIEMMPTEGEYEFQNAVVGGSIPKEYIPAIDNGIQEASQSGIIAGYPVINFK VKLFDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLEPSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVIR AFVPLSEMFGYATTLRSKTQGRGNYVMQFDHYEEVPKSIQDKVIGERK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=695, Percent_Identity=42.7338129496403, Blast_Score=565, Evalue=1e-161, Organism=Homo sapiens, GI19923640, Length=725, Percent_Identity=40.1379310344828, Blast_Score=497, Evalue=1e-140, Organism=Homo sapiens, GI25306287, Length=701, Percent_Identity=37.8031383737518, Blast_Score=439, Evalue=1e-123, Organism=Homo sapiens, GI25306283, Length=450, Percent_Identity=44.4444444444444, Blast_Score=342, Evalue=7e-94, Organism=Homo sapiens, GI217272892, Length=807, Percent_Identity=23.6679058240397, Blast_Score=133, Evalue=7e-31, Organism=Homo sapiens, GI217272894, Length=807, Percent_Identity=23.6679058240397, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI157426893, Length=143, Percent_Identity=37.0629370629371, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI4503483, Length=481, Percent_Identity=25.3638253638254, Blast_Score=101, Evalue=3e-21, Organism=Homo sapiens, GI94966754, Length=139, Percent_Identity=38.8489208633094, Blast_Score=100, Evalue=8e-21, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=37.5, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=37.5, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=37.5, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI94966752, Length=68, Percent_Identity=44.1176470588235, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1789738, Length=697, Percent_Identity=60.1147776183644, Blast_Score=852, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=483, Percent_Identity=28.7784679089027, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI48994988, Length=179, Percent_Identity=39.6648044692737, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788922, Length=142, Percent_Identity=39.4366197183099, Blast_Score=97, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17533571, Length=694, Percent_Identity=39.6253602305475, Blast_Score=508, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17556745, Length=725, Percent_Identity=30.2068965517241, Blast_Score=340, Evalue=2e-93, Organism=Caenorhabditis elegans, GI17552882, Length=806, Percent_Identity=22.4565756823821, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17506493, Length=475, Percent_Identity=24.4210526315789, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17557151, Length=140, Percent_Identity=38.5714285714286, Blast_Score=96, Evalue=8e-20, Organism=Caenorhabditis elegans, GI71988819, Length=143, Percent_Identity=34.2657342657343, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71988811, Length=143, Percent_Identity=34.2657342657343, Blast_Score=83, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6323098, Length=689, Percent_Identity=41.0740203193033, Blast_Score=550, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322359, Length=783, Percent_Identity=33.5887611749681, Blast_Score=395, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6324707, Length=474, Percent_Identity=25.1054852320675, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6320593, Length=474, Percent_Identity=25.1054852320675, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6323320, Length=141, Percent_Identity=37.5886524822695, Blast_Score=98, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6324166, Length=145, Percent_Identity=37.2413793103448, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24582462, Length=696, Percent_Identity=41.5229885057471, Blast_Score=550, Evalue=1e-156, Organism=Drosophila melanogaster, GI221458488, Length=724, Percent_Identity=33.4254143646409, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI24585709, Length=478, Percent_Identity=24.8953974895398, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24585711, Length=478, Percent_Identity=24.8953974895398, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24585713, Length=478, Percent_Identity=24.8953974895398, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI78706572, Length=137, Percent_Identity=37.956204379562, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI28574573, Length=142, Percent_Identity=35.9154929577465, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI21357743, Length=137, Percent_Identity=35.036496350365, Blast_Score=77, Evalue=6e-14,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76428; Mature: 76297
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGAATMDWMEQEQER CCCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHC GITITSAATTCFWKDHQVNIIDTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETV CEEEEECCEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHHCEEEEEECCCCCCCHHHHH WRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANAVPLQLPIGAEDSFSGIIDLV HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHH KNDAIIYKDDLGTVMDETEIPEDMKEMAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEE HCCEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IKTALRKGVLANKIVPVLCGSAYKNKGVQLLLDAIIEFMPSPLDIEDVKGTEPTTGEEMT HHHHHHHCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHC RPADAKAPLAALAFKIATDPFIGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHA CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHC NHREDVEELKAGELGAIVGLKDTTTGDTLCDDADPIILENMEFPEPVIDVSIEPKTKAGQ CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCH EKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQV HHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCH AYKETIKKHVKAEGKFIRQSGGRGQYGHCWIEMMPTEGEYEFQNAVVGGSIPKEYIPAID HHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEEECCCCCCHHHCEEECCCCCHHHHHHHH NGIQEASQSGIIAGYPVINFKVKLFDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLE HHHHHHHCCCCEEECEEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCEEEEC PSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVIRAFVPLSEMFGYATTLRSKT CCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCC QGRGNYVMQFDHYEEVPKSIQDKVIGERK CCCCCEEEEECCHHHHHHHHHHHHCCCCC >Mature Secondary Structure ANKEYPLAKFRNIGIMAHIDAGKTTATERILFYTGKTHKIGETHEGAATMDWMEQEQER CCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHC GITITSAATTCFWKDHQVNIIDTPGHVDFTVEVERSLRVLDGAVTILDAKSGVEPQTETV CEEEEECCEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHHCEEEEEECCCCCCCHHHHH WRQADNYKVPRMVFINKMDKLGADFLMSVGTLRERLHANAVPLQLPIGAEDSFSGIIDLV HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHH KNDAIIYKDDLGTVMDETEIPEDMKEMAEEYRTMLLEAVAEVDEDIMMKYLEGEEISVEE HCCEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IKTALRKGVLANKIVPVLCGSAYKNKGVQLLLDAIIEFMPSPLDIEDVKGTEPTTGEEMT HHHHHHHCHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHC RPADAKAPLAALAFKIATDPFIGKLAFTRIYSGTMKSGTYVFNSNKGKRERIGRLVKMHA CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHC NHREDVEELKAGELGAIVGLKDTTTGDTLCDDADPIILENMEFPEPVIDVSIEPKTKAGQ CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCH EKMGIALAKLAEEDPTFRTYTNQETGQTIIAGMGELHLEIIVDRLIREFKVECNVGQPQV HHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCH AYKETIKKHVKAEGKFIRQSGGRGQYGHCWIEMMPTEGEYEFQNAVVGGSIPKEYIPAID HHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEEECCCCCCHHHCEEECCCCCHHHHHHHH NGIQEASQSGIIAGYPVINFKVKLFDGSYHDVDSSEMAFKIAGSMAFKNAMSKADAVLLE HHHHHHHCCCCEEECEEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCEEEEC PSMKVEVVVPEEYMGDVIGDINSRRGRIEGMTPRAGAEVIRAFVPLSEMFGYATTLRSKT CCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCC QGRGNYVMQFDHYEEVPKSIQDKVIGERK CCCCCEEEEECCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA