Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is gpmI

Identifier: 170756209

GI number: 170756209

Start: 274620

End: 276149

Strand: Direct

Name: gpmI

Synonym: CLD_0546

Alternate gene names: 170756209

Gene position: 274620-276149 (Clockwise)

Preceding gene: 170755354

Following gene: 170757014

Centisome position: 6.94

GC content: 31.83

Gene sequence:

>1530_bases
ATGAGTAAAAAGCCAGTAGTTTTAATGATACTAGATGGATTTGGATTAACAAATAAGGTAGATGGCAATGCAGTATCAGC
AGCCAATAAACCTAATTTAGATAATATATTAAAAAAATATCCTCATACTCAATTAGGTGCCAGTGGAATGGATGTAGGCC
TTCCAGAAGGTCAAATGGGTAATTCAGAAGTAGGACATTTAAATATAGGTGCAGGAAGAATAGTATATCAAGCCCTTACA
AAAATAACAAAATCTATTTCTGATGGAGATTTTTTTGAAAATGTAGCTTTAAATAAAGCTATAGAAAATGCAAAGAAAAA
TAATTCTACTCTACACCTTTTAGGTCTTTTATCACCAGGTGGAGTACATTCTCATATAGACCATTTAAAAGGTTTAATAA
AATTAGCAAAAGAAAAGGATATTAAAAAAGTTTATATTCATGCATTTTTAGATGGAAGAGATGTAGCCCCATCATCAGCT
AAAGAATATATAGAAGACATAGAAAATTATATGCAAGAAATTGGCGTAGGTGAAATAGCTACAATATCAGGAAGATATTA
TGCCATGGACAGAGATAAAAGATGGGAAAGGGTACAGCTTTGTTATAATGCCATTATACTAGGAAAAGGTGAAGAAGCTA
ATTCAGCAGTAGAAGGTTTAGAAAAATCTTATAGAGATAATAAAACTGATGAATTTGTTTTACCATCAGTAGTATTAAAA
GAAGGAAAACCTAAGGCAAAAATAGAAAATAAAGATTCAGTAGTATTCTTTAACTTTAGACCAGATAGAGCTAGAGAACT
TACAAGAGCTATAAATGATAAAGTATTTGATGGTTTTGAAAGAGAAACTTTAGATTTGACTTATGTTACTATGACAGAAT
ATGATAGTACTTTAGAAAATGTAGAGGTAGCTTTTCCTCCAGAGCATTTAAATAATACTTTAGGAGAATATGTAAGCAAA
AATGGTAAAAAACAATTAAGAATAGCTGAAACAGAAAAATATGCTCATGTTACTTTCTTCTTTAATGGTGGAGTAGAAGA
GCCTAATGAAGGTGAAGATAGAGTTTTAATCCCATCACCAAAGGTAGCAACTTACGATATGCAACCAGAGATGAATGCAT
ATGAAGTTACAGATAAGCTTTTAGAAAGACTAGATGAAGATAAATACGATATGGTAATATTAAACTTTGCAAATCCAGAT
ATGGTAGGTCATACAGGAGTATTTGAAGCAGCAAAAAAAGCTATAGAAACTGTGGATGAATGTGTAGGTAAAATAGTCAA
TAAAGTTTTAGAAAAGGATGGAACAGCATTTATTACAGCTGATCATGGAAATTCAGAAGAAATGATAGACTATTCTACAG
GAAAGCCTATGACTGCCCATACAACAAACCCAGTACCATTTATGTATGTGTCTAATGATAGTAAAGAGCTAAGAGAGGGT
GGCAAACTAGCAGACATAGCACCAACAATGTTACAACTCATGAACCTTCCTAAACCCTCTGAAATGACAGGGAATAGTCT
TATTAAATAA

Upstream 100 bases:

>100_bases
AATTATTAAAAGTGACAAGTGACAAGCTATAAGTTACAAATTGTTTTATATTAGCACTTCTCATTTGTATATTTTTATTT
AATGAGATTTGGAGGTAAAA

Downstream 100 bases:

>100_bases
TAGGGAAACTATATTTAAGATAAAATAATTTTTTTAAAAATAAGGAGGACCCAACATGAAAAATTATATTGAAATAGTAG
ATGTATACGCAAGACAAATC

Product: phosphoglyceromutase

Products: NA

Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MSKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMGNSEVGHLNIGAGRIVYQALT
KITKSISDGDFFENVALNKAIENAKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSA
KEYIEDIENYMQEIGVGEIATISGRYYAMDRDKRWERVQLCYNAIILGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLK
EGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLENVEVAFPPEHLNNTLGEYVSK
NGKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSPKVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPD
MVGHTGVFEAAKKAIETVDECVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSNDSKELREG
GKLADIAPTMLQLMNLPKPSEMTGNSLIK

Sequences:

>Translated_509_residues
MSKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMGNSEVGHLNIGAGRIVYQALT
KITKSISDGDFFENVALNKAIENAKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSA
KEYIEDIENYMQEIGVGEIATISGRYYAMDRDKRWERVQLCYNAIILGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLK
EGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLENVEVAFPPEHLNNTLGEYVSK
NGKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSPKVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPD
MVGHTGVFEAAKKAIETVDECVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSNDSKELREG
GKLADIAPTMLQLMNLPKPSEMTGNSLIK
>Mature_508_residues
SKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMGNSEVGHLNIGAGRIVYQALTK
ITKSISDGDFFENVALNKAIENAKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAK
EYIEDIENYMQEIGVGEIATISGRYYAMDRDKRWERVQLCYNAIILGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLKE
GKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLENVEVAFPPEHLNNTLGEYVSKN
GKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSPKVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPDM
VGHTGVFEAAKKAIETVDECVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSNDSKELREGG
KLADIAPTMLQLMNLPKPSEMTGNSLIK

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG0696

COG function: function code G; Phosphoglyceromutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]

Homologues:

Organism=Escherichia coli, GI1790041, Length=510, Percent_Identity=52.156862745098, Blast_Score=554, Evalue=1e-159,
Organism=Caenorhabditis elegans, GI17507741, Length=513, Percent_Identity=43.859649122807, Blast_Score=432, Evalue=1e-121,
Organism=Caenorhabditis elegans, GI32564249, Length=513, Percent_Identity=43.859649122807, Blast_Score=432, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR011258
- InterPro:   IPR006124
- InterPro:   IPR005995 [H]

Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 56540; Mature: 56409

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMG
CCCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIENAKKNNSTLHLLGLLSPG
CCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
GVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIENYMQEIGVGEIA
CHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
TISGRYYAMDRDKRWERVQLCYNAIILGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLK
EECCEEEEECCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCEECCHHHHH
EGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLEN
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHC
VEVAFPPEHLNNTLGEYVSKNGKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSP
CEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCC
KVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPDMVGHTGVFEAAKKAIETVDE
CEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
CVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSNDSKELREG
HHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEECCCCCEEEEEECCCHHHHHCC
GKLADIAPTMLQLMNLPKPSEMTGNSLIK
CCCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQLGASGMDVGLPEGQMG
CCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIENAKKNNSTLHLLGLLSPG
CCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
GVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIENYMQEIGVGEIA
CHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
TISGRYYAMDRDKRWERVQLCYNAIILGKGEEANSAVEGLEKSYRDNKTDEFVLPSVVLK
EECCEEEEECCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCEECCHHHHH
EGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFERETLDLTYVTMTEYDSTLEN
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHC
VEVAFPPEHLNNTLGEYVSKNGKKQLRIAETEKYAHVTFFFNGGVEEPNEGEDRVLIPSP
CEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCC
KVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANPDMVGHTGVFEAAKKAIETVDE
CEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
CVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMTAHTTNPVPFMYVSNDSKELREG
HHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEECCCCCEEEEEECCCHHHHHCC
GKLADIAPTMLQLMNLPKPSEMTGNSLIK
CCCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA