| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756208
Identifier: 170756208
GI number: 170756208
Start: 60984
End: 62426
Strand: Direct
Name: 170756208
Synonym: CLD_0761
Alternate gene names: NA
Gene position: 60984-62426 (Clockwise)
Preceding gene: 170756810
Following gene: 170754737
Centisome position: 1.54
GC content: 27.44
Gene sequence:
>1443_bases ATGAAGGGTAATAAAAAGATTAATTTACAAGAAAAAGAATTATATAAGTTATTTAACGAAATAAAATTTGAAGAAAGTGA GTTAAATAATATGGAGGAAGAAGTAGATATTATTCAAAAGGAGAGAATAAAGAAAAATTTAAATAATAAAATAAAGAGAA AAAATAGGTCTAACAAGCTAAAATATACTTCTATTGCCGCAGCTATAACATTAGTATTTTCAATAGGTATCGTTACTGCA TCACCGACCTTTGCTAAAAATATTCCAGTTTTAAATTCTATAATGCAAACACTAAATAATAAATATGGCAATAGGGGTGA TTATGCAAAATACTCTGAAATAATAAATAAATCAGTTTCAAACAATGGAATAACAATTACAATAAATGAAGTAATTGCAG ATGACTCAAAATTAGTTATAAGTTATACATTAAAAACTAATAAGAAAATAAAAGATTTAGAAGTATTTGGTCTGGGGGGA TTCTTAAAGATAGATGGTAAAACTTTTTCCTCAATGGGGACTTCTTTTGGCCAGTATATAGATGATTATACTTATATAGG TAGTGAGGAAATTCACACTAGTATACCAGAAGATAAAAAATTTAATATTGATGTAAATATTACAGAGGTATCTGATATAA AAGGCAAGTGGAATTTTGCTTTTAGTGCATCAAAAGAAGAAATTTCTAGGGAAAGTACTGTGTTTAAACCAAATCAAAAA TTGGATTTGCCAGACAGTAATGTAGCTATCGATAAAGTAGTATTTTCACCTATAGATACCTCTATTTTCATAACTGGATA TGGTAAGAATAAAAATATAAAAGCAGGACCTAATGGTGGTATGTTTGACTACAATTATTGGATTGCTTTTGATGATACTG GTGTGGAACTTATACCAAAAGGTCTTGGTGGTGGAAAGTTTGATTTTAATAAAAATACATTTTCTTCTGAAATGCAATAT GAAAAGTCTAAAAGTATTCCAAAATATTTAACTATTATTCCTTGCAAAATTACTCCTTCAGGGGGAGGTGGAGTGAAGAG AGATGAGAATGGGAAAGAAATGCCAATTACTATACAAACCAAGAAACCTAAAGAAATAGGCAAAATTATAGATGGTGTAT ATCCAATAGAGCTTTCTCAAGGTAAAATGGGAAAACTTATAATAAATGATATAAAGACAGAAAATGATAAAACCATAGTT AAATATACAGCTAAAGGAATGGCACCTTACTTTCAAGCCCAAGATCTTCTTATAAAAGATGATAAAGGAAAATGTATTGA AATTAAAGATTATATTAGAAGAGCAGATGATCAAAATCCTAATGAATTTACAAAGATATTTGAAGCATTAGATCCTAATA AAAAATATACTATATTTACAAATAACTTTGATAATGTAGAATTTAGAGAGGATCTAAAATTTAAGATTGAGCTTAATAAA TAA
Upstream 100 bases:
>100_bases CTAAGATTTTGGGAGTGAATAGAAATTTAATAGATAAAAGGCTTTCAAGGGGACGTAAATTTTTGAGGGAAAAACTTATA CTTTTGAAAGGAGAAATATT
Downstream 100 bases:
>100_bases ATAGAAGAAATAAATCCCTAGAATATTAATAAATTAGGGATTTATTTTTTTAGCTACTTATATAATTAATGCTTTTATAC TTTAGGGTTATTTAGTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKLKYTSIAAAITLVFSIGIVTA SPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVSNNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGG FLKIDGKTFSSMGTSFGQYIDDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFKPNQK LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPKGLGGGKFDFNKNTFSSEMQY EKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQTKKPKEIGKIIDGVYPIELSQGKMGKLIINDIKTENDKTIV KYTAKGMAPYFQAQDLLIKDDKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK
Sequences:
>Translated_480_residues MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKLKYTSIAAAITLVFSIGIVTA SPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVSNNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGG FLKIDGKTFSSMGTSFGQYIDDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFKPNQK LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPKGLGGGKFDFNKNTFSSEMQY EKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQTKKPKEIGKIIDGVYPIELSQGKMGKLIINDIKTENDKTIV KYTAKGMAPYFQAQDLLIKDDKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK >Mature_480_residues MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKLKYTSIAAAITLVFSIGIVTA SPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVSNNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGG FLKIDGKTFSSMGTSFGQYIDDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFKPNQK LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPKGLGGGKFDFNKNTFSSEMQY EKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQTKKPKEIGKIIDGVYPIELSQGKMGKLIINDIKTENDKTIV KYTAKGMAPYFQAQDLLIKDDKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54359; Mature: 54359
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKL CCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE KYTSIAAAITLVFSIGIVTASPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVS EHHHHHHHHHHHHHHHHEECCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC NNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGGFLKIDGKTFSSMGTSFGQYI CCCEEEEEHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHHHH DDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFKPNQK CCCEECCCHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHHCCCCCEECCCCC LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPK CCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEC GLGGGKFDFNKNTFSSEMQYEKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQT CCCCCEECCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEC KKPKEIGKIIDGVYPIELSQGKMGKLIINDIKTENDKTIVKYTAKGMAPYFQAQDLLIKD CCCHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEC DKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK CCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCEEEEEECC >Mature Secondary Structure MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKL CCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE KYTSIAAAITLVFSIGIVTASPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVS EHHHHHHHHHHHHHHHHEECCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC NNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGGFLKIDGKTFSSMGTSFGQYI CCCEEEEEHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHHHH DDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFKPNQK CCCEECCCHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHHCCCCCEECCCCC LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPK CCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEC GLGGGKFDFNKNTFSSEMQYEKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQT CCCCCEECCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEC KKPKEIGKIIDGVYPIELSQGKMGKLIINDIKTENDKTIVKYTAKGMAPYFQAQDLLIKD CCCHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEC DKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK CCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA