| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756198
Identifier: 170756198
GI number: 170756198
Start: 613849
End: 615159
Strand: Reverse
Name: 170756198
Synonym: CLD_0250
Alternate gene names: NA
Gene position: 615159-613849 (Counterclockwise)
Preceding gene: 170754820
Following gene: 170756145
Centisome position: 15.54
GC content: 21.36
Gene sequence:
>1311_bases ATGAGTAATTTTTTAGAAGAATTAAAAGCCACTAAAATTATAAGTAAAAATGATATTGAAAAGATTAAGAAATTTATAAA TATTAAGTATAAAAATGAAGATAGCAAAAGAAAAGCTTATATGGTATCTTCTACTATTCATAATATTATTGAAAGTAAGA TAGATTTCTTTCCAAAATCAATACATAAAGATTTAAAAAATGCTATTTTAAAAAATACATTTTTAAATAATAAAGATTCC ATTTATTTATGGGATATCTTTTATTCTTATATAGACTATGTAGATTTAAAAAAAGAAAACATAAAAATATTATTAAATTG GATTAACATTAATATAAAAAATAAAACTGATGAAGAATCTTTAGTAAATTATTTCTATACAAATAGTTTACTAAAAAATC ATGAAAAAAATGGTGAAATTAAAACTAGTTCTAGTTCTAGTTCTAGTTCTAGTTCTAGTTCTAGTTCTAGTTCTAGTTCT AGTTCTAGTTCTAGTTCTAAAGATTCTAGCACCAAAATCACAGATGAACAACCCTATATAAAAATTAAAAAGGTTGATTC TATTTATCTACAAAACGCCCATACAGAATCTAATAATAATTTTATTAATATCAAACAGAATACAGCAAATATAACAAATA ATAAATATAATACTAAAAGTATTACTAAAAAATTCAATATGGATTTTTTATACAAAAATAATATATTTAAACTTTATAAT AACTCTATTACTTTTGCATTAACTATATTATTTATTTCTTCAATATCTATATATTTATTTAATATGGATACTTCTATTAA AACTAATAGTAAAAATATTATTGTTTATGAAAATAAAAATGTTAAAACTAAAAAAAATAATATTCTCGATAAAAATAAGC ATCTACCTCAATATGTTAAATATAAAACTTTAAATAATGAAAAACTAAAGAAATATTTATATACCAAAAACTCTTTATTA GCAGATGAACCTTATTTCTCATCTATAATATCATCTGCAGAGGAATTTGATATAAATCCTTTAATATTATTTGCAATAAC TGGACAAGAACAAGGTTTTGTACCTAAAAACAACAAGTCTGCTAAAAAAATAGGAAATAATCCATTCAACGTTTTTCATA GTTGGGAAGAGTATAATTCTGATATTAAAGATTCTTCTAGAATAGCAGGAAGAACCGTATTTAATTTATTAAAAACTATG CCTAAGGGACAAGATCCTTTTAAATGGGTGAACAATACATATGCTGAAGATATTAATTGGTGGAAAGGTGTTAAATCCTT ATTTAATGAATTAGAAAAGGCCGTAAAATAA
Upstream 100 bases:
>100_bases TTTATTATTTTCTCTAATAATTTAAGTAACAACATTATATGGCGATAATTATACTATTTAGTAGAATTATCATTGGAAGG ATTATATAGGAACATATATT
Downstream 100 bases:
>100_bases GAAATCTTTGTTAAATATATAATTAATTGAAAAGGGGTTTATTTATTTCCAAATTCGTATTAAAATCTAGAGGTACGTAC TAAATTTTTTTATAGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSNFLEELKATKIISKNDIEKIKKFINIKYKNEDSKRKAYMVSSTIHNIIESKIDFFPKSIHKDLKNAILKNTFLNNKDS IYLWDIFYSYIDYVDLKKENIKILLNWININIKNKTDEESLVNYFYTNSLLKNHEKNGEIKTSSSSSSSSSSSSSSSSSS SSSSSSKDSSTKITDEQPYIKIKKVDSIYLQNAHTESNNNFINIKQNTANITNNKYNTKSITKKFNMDFLYKNNIFKLYN NSITFALTILFISSISIYLFNMDTSIKTNSKNIIVYENKNVKTKKNNILDKNKHLPQYVKYKTLNNEKLKKYLYTKNSLL ADEPYFSSIISSAEEFDINPLILFAITGQEQGFVPKNNKSAKKIGNNPFNVFHSWEEYNSDIKDSSRIAGRTVFNLLKTM PKGQDPFKWVNNTYAEDINWWKGVKSLFNELEKAVK
Sequences:
>Translated_436_residues MSNFLEELKATKIISKNDIEKIKKFINIKYKNEDSKRKAYMVSSTIHNIIESKIDFFPKSIHKDLKNAILKNTFLNNKDS IYLWDIFYSYIDYVDLKKENIKILLNWININIKNKTDEESLVNYFYTNSLLKNHEKNGEIKTSSSSSSSSSSSSSSSSSS SSSSSSKDSSTKITDEQPYIKIKKVDSIYLQNAHTESNNNFINIKQNTANITNNKYNTKSITKKFNMDFLYKNNIFKLYN NSITFALTILFISSISIYLFNMDTSIKTNSKNIIVYENKNVKTKKNNILDKNKHLPQYVKYKTLNNEKLKKYLYTKNSLL ADEPYFSSIISSAEEFDINPLILFAITGQEQGFVPKNNKSAKKIGNNPFNVFHSWEEYNSDIKDSSRIAGRTVFNLLKTM PKGQDPFKWVNNTYAEDINWWKGVKSLFNELEKAVK >Mature_435_residues SNFLEELKATKIISKNDIEKIKKFINIKYKNEDSKRKAYMVSSTIHNIIESKIDFFPKSIHKDLKNAILKNTFLNNKDSI YLWDIFYSYIDYVDLKKENIKILLNWININIKNKTDEESLVNYFYTNSLLKNHEKNGEIKTSSSSSSSSSSSSSSSSSSS SSSSSKDSSTKITDEQPYIKIKKVDSIYLQNAHTESNNNFINIKQNTANITNNKYNTKSITKKFNMDFLYKNNIFKLYNN SITFALTILFISSISIYLFNMDTSIKTNSKNIIVYENKNVKTKKNNILDKNKHLPQYVKYKTLNNEKLKKYLYTKNSLLA DEPYFSSIISSAEEFDINPLILFAITGQEQGFVPKNNKSAKKIGNNPFNVFHSWEEYNSDIKDSSRIAGRTVFNLLKTMP KGQDPFKWVNNTYAEDINWWKGVKSLFNELEKAVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50494; Mature: 50362
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFLEELKATKIISKNDIEKIKKFINIKYKNEDSKRKAYMVSSTIHNIIESKIDFFPKS CCHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IHKDLKNAILKNTFLNNKDSIYLWDIFYSYIDYVDLKKENIKILLNWININIKNKTDEES HHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHH LVNYFYTNSLLKNHEKNGEIKTSSSSSSSSSSSSSSSSSSSSSSSSKDSSTKITDEQPYI HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KIKKVDSIYLQNAHTESNNNFINIKQNTANITNNKYNTKSITKKFNMDFLYKNNIFKLYN EEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEEEC NSITFALTILFISSISIYLFNMDTSIKTNSKNIIVYENKNVKTKKNNILDKNKHLPQYVK CCHHHHHHHHHHHCCEEEEEECCCCEEECCCEEEEEECCCCCCHHCCCCCCCCCCCHHHH YKTLNNEKLKKYLYTKNSLLADEPYFSSIISSAEEFDINPLILFAITGQEQGFVPKNNKS EECCCHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCCCEEEEEEEECCCCCCCCCCCCC AKKIGNNPFNVFHSWEEYNSDIKDSSRIAGRTVFNLLKTMPKGQDPFKWVNNTYAEDINW HHHHCCCHHHHEECHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHH WKGVKSLFNELEKAVK HHHHHHHHHHHHHHCC >Mature Secondary Structure SNFLEELKATKIISKNDIEKIKKFINIKYKNEDSKRKAYMVSSTIHNIIESKIDFFPKS CHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IHKDLKNAILKNTFLNNKDSIYLWDIFYSYIDYVDLKKENIKILLNWININIKNKTDEES HHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHH LVNYFYTNSLLKNHEKNGEIKTSSSSSSSSSSSSSSSSSSSSSSSSKDSSTKITDEQPYI HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KIKKVDSIYLQNAHTESNNNFINIKQNTANITNNKYNTKSITKKFNMDFLYKNNIFKLYN EEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEEEC NSITFALTILFISSISIYLFNMDTSIKTNSKNIIVYENKNVKTKKNNILDKNKHLPQYVK CCHHHHHHHHHHHCCEEEEEECCCCEEECCCEEEEEECCCCCCHHCCCCCCCCCCCHHHH YKTLNNEKLKKYLYTKNSLLADEPYFSSIISSAEEFDINPLILFAITGQEQGFVPKNNKS EECCCHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCCCEEEEEEEECCCCCCCCCCCCC AKKIGNNPFNVFHSWEEYNSDIKDSSRIAGRTVFNLLKTMPKGQDPFKWVNNTYAEDINW HHHHCCCHHHHEECHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHH WKGVKSLFNELEKAVK HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA