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The map label for this gene is aorR

Identifier: 170756169

GI number: 170756169

Start: 2071399

End: 2073294

Strand: Reverse

Name: aorR

Synonym: CLD_2687

Alternate gene names: 170756169

Gene position: 2073294-2071399 (Counterclockwise)

Preceding gene: 170755145

Following gene: 170756329

Centisome position: 52.38

GC content: 29.85

Gene sequence:

>1896_bases
ATGAAGGATAATTTCATAAATGAGAAGTTTTGTATATTAAAATCTCATGAAAAATGTAATAGTTTAGGGATTAGCAAAGA
TTTAGTATACAGTAAAAAAATAATAAAGGATGAAGAACTTAAAAGGGAATTAAATAATAATTCAGAGTTAATTATTATTG
CTACACCTTTTATGAATAAGCTCTACCAATTTGTTAAGGGCTCTAACTTTTTCGTTATTCTTACAGATGGGGATGGTTGC
ATATTAAATGTCATAGGAGATGAAAGTATATTAAAGGAAGCTTCTAATGTGAAAATGATTCCAGGAGCTTATATGGATGA
AAAAAATATGGGGACAAACGCCATGAGTATGGCTTTAAGTGAAAAATCTCCAATTCAGATATCTGGAGAGGACCATTACG
TTAAAGCTTATCATAGATGGACTTGTTCTGCAGCTCCCATAAAAGATATTAATGGAAAAATAATTGGGATTCTTGATTTG
ACAGGATATAGTGAAAATGTACATTCTCATACCTTAGGAATGGTAGCGGCTGCAACTAATGCCATTGAAAAAATGATAGA
ATTAAATGATTATAATAGAGCTTTACAAATATCCAAAAAGAGTATTGAGAATGTATTTAATTCTATACAAAGAGCTATAT
TAAGGGTGGATTTGTCAGGTGCAATAAAGACCATAAATAACAACGCTATAGAACTTTTAGGTTTTAATGAAAATGATATA
AAAAGTATGAAGATGTGGGATTTAATACCTGACTGGTCTATGGTTTTAGATGAGATCTACGACAAAGGTAGTTTTGTAGA
TGAAGATGTATATGTACACTGTCTTAAAAATAAACTTCAATTGAATTTAAGCGCCTATCCTATATATGATTCATCCATGA
GAATTATTGAGGTAACCTGTTTACTTTCAGATATACAAAAAACTCGAAAACTTGCAGGAAAAATACTTAGTGGTCAAGCC
ATTTATACTTTTGATAAAATTATAGGCAAAAGCAGAAAACTTCTTAGCATAATGGATTATTCAAAAAAAATTGCAGATAG
CAGATCTACTATACTTATTACCGGTGATAGTGGAACGGGAAAGGAAGTTTTTGCACAGTCAATACACAACTATAGTGATA
GAAAAGATAAGCCCTTTATAGCTGTTAATTGTGGAGCTATCCCAAGAAATTTGATTGAATCTGAACTTTTTGGATATGAA
GAAGGAGCCTTTACTGGAGCAAAAAGAGGAGGATATAGAGGAAAATTTGAAAATTCACATGGTGGAACCATATTTCTTGA
TGAAATAGGGGAGATGCCTTTAGATATGCAAATAAAACTTTTAAGGGTTATAGAAGAAGGCGTTATAAATAGAATAGGAA
GTTCTAAACAAATACCTGTAAATTCTAGAATAATAGCTGCCACTAATAAAGATTTAAGAGAAGAGGTAGAGAAGGGAAAT
TTTAGAAAGGATTTATTTTATAGAATAAATGTATTACCAGTATATTTACCAGCATTAAAAGAAAGAAGAGAGGATATACC
TTTACTTATAGATTATTTTATGAATAAAACATCTAAACATTTAAATAAAAGAAAGGTAGAAATACCTTCTGTATATATGG
AAAGGCTTATTAATTATCATTGGCCAGGTAATATAAGAGAATTAGAAAATATAGTAGAATTAATAATAAATGCGGAAAGT
ATTGAAATTATTAATAATATAGACCATTATAGTAGCAAGGAAGTTAGAGATAAGGCAAAAGAAGAAACTATGGTATTTAA
TCTTGAAATCGTGGAGAAAAACCACATTAAAGAGGTATTAAATAAGTTTGATGGTAATGTTTCTTCCGCTGCAAAGGCTC
TTGGTATAGGAAGAAATACTCTTTATAGAAAAATAGAAAAATACTCACTGTACTAA

Upstream 100 bases:

>100_bases
GAAGGCTTTATTAAACCTGGAGATAAAATAGAGGTTTTATCCGATTTTTAGCATTAAAATTATTTGATAAGCTGTCTTTA
TCTTAAAGGGGAAGATTTAT

Downstream 100 bases:

>100_bases
TATAGAACAAAGTTCCAAAAAGGAACAATAAAACATAAAAAAATGTATCTAAATAGAACAAGAAGGATTGTTATTTTCAA
TATTAATTTTAAGCAAGTAT

Product: aor transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MKDNFINEKFCILKSHEKCNSLGISKDLVYSKKIIKDEELKRELNNNSELIIIATPFMNKLYQFVKGSNFFVILTDGDGC
ILNVIGDESILKEASNVKMIPGAYMDEKNMGTNAMSMALSEKSPIQISGEDHYVKAYHRWTCSAAPIKDINGKIIGILDL
TGYSENVHSHTLGMVAAATNAIEKMIELNDYNRALQISKKSIENVFNSIQRAILRVDLSGAIKTINNNAIELLGFNENDI
KSMKMWDLIPDWSMVLDEIYDKGSFVDEDVYVHCLKNKLQLNLSAYPIYDSSMRIIEVTCLLSDIQKTRKLAGKILSGQA
IYTFDKIIGKSRKLLSIMDYSKKIADSRSTILITGDSGTGKEVFAQSIHNYSDRKDKPFIAVNCGAIPRNLIESELFGYE
EGAFTGAKRGGYRGKFENSHGGTIFLDEIGEMPLDMQIKLLRVIEEGVINRIGSSKQIPVNSRIIAATNKDLREEVEKGN
FRKDLFYRINVLPVYLPALKERREDIPLLIDYFMNKTSKHLNKRKVEIPSVYMERLINYHWPGNIRELENIVELIINAES
IEIINNIDHYSSKEVRDKAKEETMVFNLEIVEKNHIKEVLNKFDGNVSSAAKALGIGRNTLYRKIEKYSLY

Sequences:

>Translated_631_residues
MKDNFINEKFCILKSHEKCNSLGISKDLVYSKKIIKDEELKRELNNNSELIIIATPFMNKLYQFVKGSNFFVILTDGDGC
ILNVIGDESILKEASNVKMIPGAYMDEKNMGTNAMSMALSEKSPIQISGEDHYVKAYHRWTCSAAPIKDINGKIIGILDL
TGYSENVHSHTLGMVAAATNAIEKMIELNDYNRALQISKKSIENVFNSIQRAILRVDLSGAIKTINNNAIELLGFNENDI
KSMKMWDLIPDWSMVLDEIYDKGSFVDEDVYVHCLKNKLQLNLSAYPIYDSSMRIIEVTCLLSDIQKTRKLAGKILSGQA
IYTFDKIIGKSRKLLSIMDYSKKIADSRSTILITGDSGTGKEVFAQSIHNYSDRKDKPFIAVNCGAIPRNLIESELFGYE
EGAFTGAKRGGYRGKFENSHGGTIFLDEIGEMPLDMQIKLLRVIEEGVINRIGSSKQIPVNSRIIAATNKDLREEVEKGN
FRKDLFYRINVLPVYLPALKERREDIPLLIDYFMNKTSKHLNKRKVEIPSVYMERLINYHWPGNIRELENIVELIINAES
IEIINNIDHYSSKEVRDKAKEETMVFNLEIVEKNHIKEVLNKFDGNVSSAAKALGIGRNTLYRKIEKYSLY
>Mature_631_residues
MKDNFINEKFCILKSHEKCNSLGISKDLVYSKKIIKDEELKRELNNNSELIIIATPFMNKLYQFVKGSNFFVILTDGDGC
ILNVIGDESILKEASNVKMIPGAYMDEKNMGTNAMSMALSEKSPIQISGEDHYVKAYHRWTCSAAPIKDINGKIIGILDL
TGYSENVHSHTLGMVAAATNAIEKMIELNDYNRALQISKKSIENVFNSIQRAILRVDLSGAIKTINNNAIELLGFNENDI
KSMKMWDLIPDWSMVLDEIYDKGSFVDEDVYVHCLKNKLQLNLSAYPIYDSSMRIIEVTCLLSDIQKTRKLAGKILSGQA
IYTFDKIIGKSRKLLSIMDYSKKIADSRSTILITGDSGTGKEVFAQSIHNYSDRKDKPFIAVNCGAIPRNLIESELFGYE
EGAFTGAKRGGYRGKFENSHGGTIFLDEIGEMPLDMQIKLLRVIEEGVINRIGSSKQIPVNSRIIAATNKDLREEVEKGN
FRKDLFYRINVLPVYLPALKERREDIPLLIDYFMNKTSKHLNKRKVEIPSVYMERLINYHWPGNIRELENIVELIINAES
IEIINNIDHYSSKEVRDKAKEETMVFNLEIVEKNHIKEVLNKFDGNVSSAAKALGIGRNTLYRKIEKYSLY

Specific function: Required For Induction Of Expression Of The Hydrogenase- 4 Structural Genes. [C]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI87082117, Length=345, Percent_Identity=42.0289855072464, Blast_Score=275, Evalue=5e-75,
Organism=Escherichia coli, GI1789233, Length=321, Percent_Identity=43.9252336448598, Blast_Score=260, Evalue=2e-70,
Organism=Escherichia coli, GI1788905, Length=306, Percent_Identity=40.8496732026144, Blast_Score=254, Evalue=1e-68,
Organism=Escherichia coli, GI1788550, Length=318, Percent_Identity=42.4528301886792, Blast_Score=251, Evalue=7e-68,
Organism=Escherichia coli, GI1786524, Length=321, Percent_Identity=39.5638629283489, Blast_Score=244, Evalue=2e-65,
Organism=Escherichia coli, GI1790437, Length=308, Percent_Identity=41.8831168831169, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1789087, Length=311, Percent_Identity=40.8360128617363, Blast_Score=238, Evalue=9e-64,
Organism=Escherichia coli, GI1790299, Length=333, Percent_Identity=38.1381381381381, Blast_Score=232, Evalue=4e-62,
Organism=Escherichia coli, GI87081858, Length=647, Percent_Identity=23.6476043276662, Blast_Score=206, Evalue=5e-54,
Organism=Escherichia coli, GI87082152, Length=318, Percent_Identity=37.1069182389937, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI87081872, Length=233, Percent_Identity=43.7768240343348, Blast_Score=201, Evalue=9e-53,
Organism=Escherichia coli, GI1787583, Length=370, Percent_Identity=32.7027027027027, Blast_Score=201, Evalue=1e-52,
Organism=Escherichia coli, GI1789828, Length=219, Percent_Identity=36.5296803652968, Blast_Score=131, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00989 PAS; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 71645; Mature: 71645

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS50112 PAS ; PS00675 SIGMA54_INTERACT_1 ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNFINEKFCILKSHEKCNSLGISKDLVYSKKIIKDEELKRELNNNSELIIIATPFMNK
CCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHCHHHHHHHHCCCCCEEEEECHHHHH
LYQFVKGSNFFVILTDGDGCILNVIGDESILKEASNVKMIPGAYMDEKNMGTNAMSMALS
HHHHHCCCCEEEEEECCCCEEEEEECCHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHCC
EKSPIQISGEDHYVKAYHRWTCSAAPIKDINGKIIGILDLTGYSENVHSHTLGMVAAATN
CCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
AIEKMIELNDYNRALQISKKSIENVFNSIQRAILRVDLSGAIKTINNNAIELLGFNENDI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHEECCCCEEEEEECCCCCC
KSMKMWDLIPDWSMVLDEIYDKGSFVDEDVYVHCLKNKLQLNLSAYPIYDSSMRIIEVTC
CHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEEEEEECCCCEEEHHHH
LLSDIQKTRKLAGKILSGQAIYTFDKIIGKSRKLLSIMDYSKKIADSRSTILITGDSGTG
HHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC
KEVFAQSIHNYSDRKDKPFIAVNCGAIPRNLIESELFGYEEGAFTGAKRGGYRGKFENSH
HHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GGTIFLDEIGEMPLDMQIKLLRVIEEGVINRIGSSKQIPVNSRIIAATNKDLREEVEKGN
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHCCC
FRKDLFYRINVLPVYLPALKERREDIPLLIDYFMNKTSKHLNKRKVEIPSVYMERLINYH
CCEEEEEEEEEHEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
WPGNIRELENIVELIINAESIEIINNIDHYSSKEVRDKAKEETMVFNLEIVEKNHIKEVL
CCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEEECHHHHHHHH
NKFDGNVSSAAKALGIGRNTLYRKIEKYSLY
HHHCCCHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDNFINEKFCILKSHEKCNSLGISKDLVYSKKIIKDEELKRELNNNSELIIIATPFMNK
CCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHCHHHHHHHHCCCCCEEEEECHHHHH
LYQFVKGSNFFVILTDGDGCILNVIGDESILKEASNVKMIPGAYMDEKNMGTNAMSMALS
HHHHHCCCCEEEEEECCCCEEEEEECCHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHCC
EKSPIQISGEDHYVKAYHRWTCSAAPIKDINGKIIGILDLTGYSENVHSHTLGMVAAATN
CCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
AIEKMIELNDYNRALQISKKSIENVFNSIQRAILRVDLSGAIKTINNNAIELLGFNENDI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHEECCCCEEEEEECCCCCC
KSMKMWDLIPDWSMVLDEIYDKGSFVDEDVYVHCLKNKLQLNLSAYPIYDSSMRIIEVTC
CHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEEEEEECCCCEEEHHHH
LLSDIQKTRKLAGKILSGQAIYTFDKIIGKSRKLLSIMDYSKKIADSRSTILITGDSGTG
HHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC
KEVFAQSIHNYSDRKDKPFIAVNCGAIPRNLIESELFGYEEGAFTGAKRGGYRGKFENSH
HHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GGTIFLDEIGEMPLDMQIKLLRVIEEGVINRIGSSKQIPVNSRIIAATNKDLREEVEKGN
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHCCC
FRKDLFYRINVLPVYLPALKERREDIPLLIDYFMNKTSKHLNKRKVEIPSVYMERLINYH
CCEEEEEEEEEHEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
WPGNIRELENIVELIINAESIEIINNIDHYSSKEVRDKAKEETMVFNLEIVEKNHIKEVL
CCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEEECHHHHHHHH
NKFDGNVSSAAKALGIGRNTLYRKIEKYSLY
HHHCCCHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA