| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756165
Identifier: 170756165
GI number: 170756165
Start: 1065298
End: 1066137
Strand: Direct
Name: 170756165
Synonym: CLD_3607
Alternate gene names: NA
Gene position: 1065298-1066137 (Clockwise)
Preceding gene: 170755304
Following gene: 170757402
Centisome position: 26.91
GC content: 24.88
Gene sequence:
>840_bases ATGGAAGTTAGAGCCAAATATCCAGGAAGTTTTGGAGAAATACTTCAAGGAAATTTAGGGGAAAAACCTGTGTTGGTTTC TTCCCCTATAAATTTATATACATGCGTTAGATTATTTGAAAGCAAAAAAGAAAAGAATTTCTATAGAAACATTAAAGCAA ATAAATTTATAAAAAATATACTTATAGATTGGGGCCATAAAGATTACATAAATAATATTCATATAGAAATAGATAGTAAA ATTCCAAGAGGAAAAGGTTTAGCTAGTAGTACCGCAGACCTATGTGCTACTTATAAATGTTTAACCAAATTATTTAAAAA GAATTATTCTATAGAAGAATTACAAAAGCATTGTTTAACTATAGAACCTACAGACAGCATAATATTTAATGAATTTACAT TGTTTGATTATAAAAAGGGAAGCTTTAAAGAAAAATTAGGCCCCTATATAAAATTTTATATATTAGTTTTAGAGGGAAAT AGAATTATAAATACTCTAGATTTTAATAATAAAAATTTAAAAGAGATGAGTTCGATAGAAGATTTAATATCAGATTTAAA AGAGAGTATAGAAAAAAGAAATATTAAAAATATATCACAGATTTCAGAGGAAAGTATAAAAAGAAATTTTCATAGATTGA CTTATGATTATTTTAATATAGTAGAAAAATATAAAAATAAAACTGGAGGATTGGGCATAATAGGATGCCATAGTGGTGAT GCTTTAGGAATAGTATATGATAATAAAGAGGATTTACTGAAAGCAGAAAAAAATATTATAGATACAGGTAATTTAAAGAA ATATACTCTAGAAACGGTTTTAAATGTTGAGGAGATATAA
Upstream 100 bases:
>100_bases CTTTAAAGTTGATTTATATTTAAAGGGTCTAGGAGCAAATATAGAATTTCAAAAAATATATAGAGATCATATAAAAGAAG AAATCTAAGGAGAGTATTTC
Downstream 100 bases:
>100_bases ATATATATTTATTTTTAATACTGCAAATATAAAAAATATACTCATAAACTAAATTGCTTTGCTAATAAGCTCTAGATATG CTTCCATTAAAAATTTTCTA
Product: putative kinase
Products: NA
Alternate protein names: Kinase; Propanediol Utilization Protein PduX; Ghmp Kinase; PduX-Like Protein; Protein Involved In Propanediol Utilization; Propanediol Utilization Kinase PduX; L-Threonine Kinase; PduX Protein; Cobalamin Biosynthesis Kinase; Propanediol Utilization Kinase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MEVRAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYRNIKANKFIKNILIDWGHKDYINNIHIEIDSK IPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQKHCLTIEPTDSIIFNEFTLFDYKKGSFKEKLGPYIKFYILVLEGN RIINTLDFNNKNLKEMSSIEDLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKNKTGGLGIIGCHSGD ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI
Sequences:
>Translated_279_residues MEVRAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYRNIKANKFIKNILIDWGHKDYINNIHIEIDSK IPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQKHCLTIEPTDSIIFNEFTLFDYKKGSFKEKLGPYIKFYILVLEGN RIINTLDFNNKNLKEMSSIEDLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKNKTGGLGIIGCHSGD ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI >Mature_279_residues MEVRAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYRNIKANKFIKNILIDWGHKDYINNIHIEIDSK IPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQKHCLTIEPTDSIIFNEFTLFDYKKGSFKEKLGPYIKFYILVLEGN RIINTLDFNNKNLKEMSSIEDLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKNKTGGLGIIGCHSGD ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI
Specific function: Unknown
COG id: COG4542
COG function: function code Q; Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32161; Mature: 32161
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVRAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYRNIKANKFIKNI CCCCCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LIDWGHKDYINNIHIEIDSKIPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQKHCLT HHHCCCHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEE IEPTDSIIFNEFTLFDYKKGSFKEKLGPYIKFYILVLEGNRIINTLDFNNKNLKEMSSIE CCCCCCEEEEEEEEEECCCCCHHHHHCCCEEEEEEEEECCEEEEEEECCCCCHHHHHHHH DLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKNKTGGLGIIGCHSGD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI EEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MEVRAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEKNFYRNIKANKFIKNI CCCCCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LIDWGHKDYINNIHIEIDSKIPRGKGLASSTADLCATYKCLTKLFKKNYSIEELQKHCLT HHHCCCHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEE IEPTDSIIFNEFTLFDYKKGSFKEKLGPYIKFYILVLEGNRIINTLDFNNKNLKEMSSIE CCCCCCEEEEEEEEEECCCCCHHHHHCCCEEEEEEEEECCEEEEEEECCCCCHHHHHHHH DLISDLKESIEKRNIKNISQISEESIKRNFHRLTYDYFNIVEKYKNKTGGLGIIGCHSGD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC ALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI EEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA