| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is arcA
Identifier: 170756148
GI number: 170756148
Start: 96786
End: 97997
Strand: Direct
Name: arcA
Synonym: CLD_0720
Alternate gene names: 170756148
Gene position: 96786-97997 (Clockwise)
Preceding gene: 170755541
Following gene: 170756919
Centisome position: 2.45
GC content: 29.46
Gene sequence:
>1212_bases ATGAATACAAAAAGAAACATTCATGTGTATTCAGAAATAGGAGATCTTAGAACAGTGTTGCTTCATAGACCAGGGGAAGA AATTGAAAATTTGATTCCGGCATATATGGAAACGTTATTATTTGATGACATACCTTATTTAAAAGTAGCACAAGAAGAAC ATGATATTTTTGCTGATACATTAAGAAGTAATGGTGTTGAAGTTTTATATTTAGAAGACTTAGCAGCAGAGGCTATACAA AATAAAGAAATTAGAGAAAAGTTTATAGAGGAAGCTATAAAAGAAAGTGGTACCACAGATAAAACATATGTAGAAAAAAT AAAAAAATATTTAGAATCAATGAAAGAAAAAGAATTGGTTTGTAAAGTTATGGCAGGTATAAGGAGAAAAGAATTAGGAA TAGATGAGTCAAAGGAAGAATATCCTTTTTTAATGTATCCTATGCCTAATCTATATTTTACAAGAGACCCATTTGCATCT ATAGGTAAAGGTATAACTATTAATGCAATGAGAACTAAAACAAGAAGAAGAGAAACTATGTTTGCAAAATATATCTTTAA ATATCATCCAGAATTTAAAGATTCAGATATACCATTATGGTATGATAGAACAGGTGAATATTGCATAGAGGGTGGAGATG AGTTAGTTTTATCTGATGAAGTTTTAGCTATAGGCCATAGTGAAAGAACAGATAGTGAATCAGTTCTAAAGGTAGCTAAA AACATATTTGAAGCAGGAGAAAGCTTTAAAGTTATATTATTGTTTGATATACCTAAAATAAGAGCGTTTATGCATTTAGA TACAGTATTTACTATGTTAGATCATGATAAATTCACAGTTCATGGAGAAATAGAAGGAACCCTTAAAGTAAATGCTATAA CTTATGATGAAAAAACTAAGGAACTTGTAATTAAGGAAGAGATAGATAGTTTAGAAGGGATTTTATCCAAATATTTAAAA AGAGATATAAAAGTTATTCGTTGTGGCGGTGGAGATAAAATTATATCTGCAAGAGAACAGTGGAATGATGGTTCAAATAC CTTAGCTATTTCACCAGGCAAGGTTATAACTTATGAAAGAAATTATGTAACTAATGAAATATTGGATAAAAATAATGTAG AGGTTTTAACTATACCGTCATCTGAATTATCTAGAGGAAGAGGCGGTCCAAGATGTATGTCTATGCCTTTATTTAGAAAA GATGTTAAATAA
Upstream 100 bases:
>100_bases TAATATTGACAGTTTACCAAATAATTATTAACATATATTTAAAGAATTAATACAAAAATAATAATGAATATAAATATCAA CTTGAAAGGGGCACAAAGGG
Downstream 100 bases:
>100_bases AATATAAATTCAAATAAGAGTTCACTTATAAATTAAGGTGAACTCTTATATTTTTGGTAAATTAAACATTTTTAAATTTA TAGTTTTAATCCAAAAGACA
Product: arginine deiminase
Products: NA
Alternate protein names: ADI; Arginine dihydrolase; AD [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MNTKRNIHVYSEIGDLRTVLLHRPGEEIENLIPAYMETLLFDDIPYLKVAQEEHDIFADTLRSNGVEVLYLEDLAAEAIQ NKEIREKFIEEAIKESGTTDKTYVEKIKKYLESMKEKELVCKVMAGIRRKELGIDESKEEYPFLMYPMPNLYFTRDPFAS IGKGITINAMRTKTRRRETMFAKYIFKYHPEFKDSDIPLWYDRTGEYCIEGGDELVLSDEVLAIGHSERTDSESVLKVAK NIFEAGESFKVILLFDIPKIRAFMHLDTVFTMLDHDKFTVHGEIEGTLKVNAITYDEKTKELVIKEEIDSLEGILSKYLK RDIKVIRCGGGDKIISAREQWNDGSNTLAISPGKVITYERNYVTNEILDKNNVEVLTIPSSELSRGRGGPRCMSMPLFRK DVK
Sequences:
>Translated_403_residues MNTKRNIHVYSEIGDLRTVLLHRPGEEIENLIPAYMETLLFDDIPYLKVAQEEHDIFADTLRSNGVEVLYLEDLAAEAIQ NKEIREKFIEEAIKESGTTDKTYVEKIKKYLESMKEKELVCKVMAGIRRKELGIDESKEEYPFLMYPMPNLYFTRDPFAS IGKGITINAMRTKTRRRETMFAKYIFKYHPEFKDSDIPLWYDRTGEYCIEGGDELVLSDEVLAIGHSERTDSESVLKVAK NIFEAGESFKVILLFDIPKIRAFMHLDTVFTMLDHDKFTVHGEIEGTLKVNAITYDEKTKELVIKEEIDSLEGILSKYLK RDIKVIRCGGGDKIISAREQWNDGSNTLAISPGKVITYERNYVTNEILDKNNVEVLTIPSSELSRGRGGPRCMSMPLFRK DVK >Mature_403_residues MNTKRNIHVYSEIGDLRTVLLHRPGEEIENLIPAYMETLLFDDIPYLKVAQEEHDIFADTLRSNGVEVLYLEDLAAEAIQ NKEIREKFIEEAIKESGTTDKTYVEKIKKYLESMKEKELVCKVMAGIRRKELGIDESKEEYPFLMYPMPNLYFTRDPFAS IGKGITINAMRTKTRRRETMFAKYIFKYHPEFKDSDIPLWYDRTGEYCIEGGDELVLSDEVLAIGHSERTDSESVLKVAK NIFEAGESFKVILLFDIPKIRAFMHLDTVFTMLDHDKFTVHGEIEGTLKVNAITYDEKTKELVIKEEIDSLEGILSKYLK RDIKVIRCGGGDKIISAREQWNDGSNTLAISPGKVITYERNYVTNEILDKNNVEVLTIPSSELSRGRGGPRCMSMPLFRK DVK
Specific function: Unknown
COG id: COG2235
COG function: function code E; Arginine deiminase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003198 - InterPro: IPR003876 [H]
Pfam domain/function: PF02274 Amidinotransf [H]
EC number: =3.5.3.6 [H]
Molecular weight: Translated: 46400; Mature: 46400
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKRNIHVYSEIGDLRTVLLHRPGEEIENLIPAYMETLLFDDIPYLKVAQEEHDIFADT CCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHH LRSNGVEVLYLEDLAAEAIQNKEIREKFIEEAIKESGTTDKTYVEKIKKYLESMKEKELV HHCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH CKVMAGIRRKELGIDESKEEYPFLMYPMPNLYFTRDPFASIGKGITINAMRTKTRRRETM HHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEECCCCHHHHCCCEEEEHHHHHHHHHHHH FAKYIFKYHPEFKDSDIPLWYDRTGEYCIEGGDELVLSDEVLAIGHSERTDSESVLKVAK HHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCEEEEECCEEEECCCCCCCHHHHHHHHH NIFEAGESFKVILLFDIPKIRAFMHLDTVFTMLDHDKFTVHGEIEGTLKVNAITYDEKTK HHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEECCHHH ELVIKEEIDSLEGILSKYLKRDIKVIRCGGGDKIISAREQWNDGSNTLAISPGKVITYER HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHCCCCCCEEEECCCEEEEEEC NYVTNEILDKNNVEVLTIPSSELSRGRGGPRCMSMPLFRKDVK CHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MNTKRNIHVYSEIGDLRTVLLHRPGEEIENLIPAYMETLLFDDIPYLKVAQEEHDIFADT CCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHH LRSNGVEVLYLEDLAAEAIQNKEIREKFIEEAIKESGTTDKTYVEKIKKYLESMKEKELV HHCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH CKVMAGIRRKELGIDESKEEYPFLMYPMPNLYFTRDPFASIGKGITINAMRTKTRRRETM HHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEECCCCHHHHCCCEEEEHHHHHHHHHHHH FAKYIFKYHPEFKDSDIPLWYDRTGEYCIEGGDELVLSDEVLAIGHSERTDSESVLKVAK HHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCEEEEECCEEEECCCCCCCHHHHHHHHH NIFEAGESFKVILLFDIPKIRAFMHLDTVFTMLDHDKFTVHGEIEGTLKVNAITYDEKTK HHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEECCHHH ELVIKEEIDSLEGILSKYLKRDIKVIRCGGGDKIISAREQWNDGSNTLAISPGKVITYER HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHCCCCCCEEEECCCEEEEEEC NYVTNEILDKNNVEVLTIPSSELSRGRGGPRCMSMPLFRKDVK CHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA